Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01522 ACAAAACTCAAATCCACCTATTTTCCTTCCCACGCCTCTCTGCATTTTCATTTTATTTTATTCCCTTTTTAAATTCCATTCCTTCTACTTCTCACACTGCTATCTTAACAACAATCTCTATCCGTCTCTCTCTTAACTTTCACCACAATCACAATCTCTTGAGCATGTTTGTTTCTGTTTGGCAAAAATTTCAAAGACTTGTGGTAGCCATGTCTTTTGCTTCTTAGCTTAATTTCTCTCCTTTTCCTCTTCTCCTTCCTCCCTTTAAGTTTTCAATAGCTCTCTCAAGGTTGGTCTTTGAGTTAGCTTTCCAGATTCTTTTCTTGAGAAAGACTTAAAAAAAAAGAAAAGAGAAGAAGGTGAAGAAAACAAAGGGATTATGTTGCACTTTTAATTGCCTTGTCTCTCCTGAGTAGTATCAAAATCTGATATCATTTTAATAAAGGAAAAAAGAAAGCTATTTCATATATATATTTTGTGAGCATCAAGCCATCCCATAAAGAAGATGACCTTGGATGGGATTTTCATTGAGCCCACCTCAACAACTGCTCCTGATCTTTCCCTTCACATAAGCCCCCCAAGCATCTCTTCTTCCTTGATTTCCAACAACAATTATGAATCTCAAGGAGGTTTCCCTTCAAGGACTGTGTCTCAAGCCCACACAGAACTCTCTCTTGGAAGGAATTTCACTTCTGGAGGACAAACACCAACACCAACACCAACACCAACACCAACATCAACACCTACACAACACAATCCTTATTATCAAATTCAAAGCCAACCCCATTTCCATCATCTTCTCCACAACAACACTAGTACCACACCAAGTGTTGTCGCAGGTACCACCACTCCCTTGAATCACATAAACTATGGTGTTTCACTGCTTGATGTACCATCATCAGAGGGCTTGAGGCCAATCAAGGGAATTCCGGTGTATCACAACCGTTCATTCCCTTTTGTTGCCATGGACCATTCTAGAGACAACAAGGAACACCATCACAAGATGTGCTTATATAATCACATGCCTTCTTATGCCTCTCTCTCTTCCTCTTGCTCCTCTCTGTGCTCCACAGCCATTCCTTCTCCTCCTTCTCCTTCACCGTCACCTTACTTTGTGGATCCCATGTCCCTCTTGAACAACGGCTCCACCGTGGCGTGTAGGGCAGCCACTGCCACAAGGTTTAATGGGTTTTCTGCCGATGCTTTCAAATCTCATTCATTGCACCAGTATGGGGTAGGCACTTCAGAAGCCTCTTCTGGGTTTATGAGATCAAGGTTTTTGCCTAAACTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCATGCTCGATTTGTTCATGCCGTTGAACTTCTTGGTGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTGAAGACCACTGACAAACCTGCAGCATCATCAGGGCATTCAGATGGGTCTGGGGAGGATGATTTGTCTCCGATGGGAAGCAACGCTGACCGCGGCGGTCTCCGGCAGTTCACAAACCACAGAGGGCGGCCGGAATGGGCGGCGCAACAAGACATGGACTACTCTTCCACCACCACTCTATGGAGTAATTCATCAAGTTGTGGAGAGTCACGGCTAAGAAGTAGTTCTAATGACGTAGATGGTCTCAGATCACCTATCCTACATTCACAAACAATATCGGTAGGGCATCAAATTCAGGAGTGTGATTCAACCCAACTCAAGAAGAACAACATGACAGGTTCTGATTTGGAGGGCAAGAACCCAAGCTTGGAATTCACATTAGGAAGACCAGATTGGGATGGCAAAGAACAAGCCTAGCTAATTTTGATTGGTTCTCCTTGTTTTCTTTTTACTTTTGCAATTTATTTATAAACCGTGGTGGCAAGTTCATCACCTTTTATGAAATTATGTAGAGGTGATTATTTAGATAAATATATATTGGTGTCTAGGAGAAGAAGAAAAGACCCTTGGTAGTTCTACAATTAGTTTCGGGAATAGTGTTTTGAGTTCATGAACAGTTTTGTTTTTATTTATGGACCCGCGAGGATGAAGAAACAACTGGAAATTAAGATGTAACAACAAGGTTTTATATAGAGATGAGATGCAGCTGAAAACTAAATGTCCAAGAGCAAGGAGGTCGAGGGACTGAAACTAGGGAAATGAATATAAAAGTTTTTTATGGA 2259 0.4201 MTLDGIFIEPTSTTAPDLSLHISPPSISSSLISNNNYESQGGFPSRTVSQAHTELSLGRNFTSGGQTPTPTPTPTPTSTPTQHNPYYQIQSQPHFHHLLHNNTSTTPSVVAGTTTPLNHINYGVSLLDVPSSEGLRPIKGIPVYHNRSFPFVAMDHSRDNKEHHHKMCLYNHMPSYASLSSSCSSLCSTAIPSPPSPSPSPYFVDPMSLLNNGSTVACRAATATRFNGFSADAFKSHSLHQYGVGTSEASSGFMRSRFLPKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPMGSNADRGGLRQFTNHRGRPEWAAQQDMDYSSTTTLWSNSSSCGESRLRSSSNDVDGLRSPILHSQTISVGHQIQECDSTQLKKNNMTGSDLEGKNPSLEFTLGRPDWDGKEQA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01522 462 MobiDBLite consensus disorder prediction 327 362 - -
Pste8g01522 462 MobiDBLite consensus disorder prediction 58 82 - -
Pste8g01522 462 FunFam Myb family transcription factor 269 327 - -
Pste8g01522 462 MobiDBLite consensus disorder prediction 381 407 - -
Pste8g01522 462 MobiDBLite consensus disorder prediction 432 462 - -
Pste8g01522 462 NCBIfam myb-like DNA-binding domain, SHAQKYF class 271 324 IPR006447 GO:0003677
Pste8g01522 462 SUPERFAMILY Homeodomain-like 268 324 IPR009057 -
Pste8g01522 462 Gene3D - 270 327 - -
Pste8g01522 462 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 460 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01522 Pste-Chr8 8463979 8470167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01522 136 459 G2-like Transcription Factor Family AT5G16560 46.064 5.87e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste8g01522 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01522 8 8463979 8470167 Pste8g01522 8 8463979 8470167 ECH
Pste7g01964 7 17949105 17955175 Pste8g01522 8 8463979 8470167 PCT