Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01519 AGAGGCAGTGATGACTAGAGACTCTCAATCTTAGTGGTGATGACAGGCAGATAGCTGGGCCCCCCATCCATGTGCGTTTCTCCTCCTTCTCCGTTGAACTTTCCATTTGGTTCTCCCTAACCCCTTTTCTGTTCTCTATGCACATTCACATTGGCTTCTCCACCTTTTCTCATCATTAATACTGCGAAACCAGTTACCAAAATAAGAAAATGATGAACAACAGTAGCATTCTTATGATAACCGTTACCCTCAGCATGATGGCTCTGTTTGGTGGCTCCCAAGATGACCACTCTGTAATGCAGGCACTGAAGGACAGCCTCAACCCGCCCGGGTGGTCCGACCCGGACTCCTGCAAGTGGGACCACATGAGATGCTCCGACGACAAACGGGTCACCCGGATCCAAATCGGGCGTCTCAACCTCCAAGGCACTCTCCCCGCTAGCCTCCAGAAGCTCACCCAGTTACAAATCTTGGAGCTTCAATACAACAACATCTCCGGTCCACTCCCCTCCCTCGCCGGCCTCTCCAACCTCCGAGTCTTCCTCGCCAGCAACAACCGCTTCTCCGCCTTCCCCACCGACTTCTTCTCCGGCATGTCGCAGCTCCAGGCCTTTGAGATCGACAACAACCCCTTTGAGCCCTGGGATATTCCTCTCTCTCTCCGAAACGCTTCTGCCCTCCAGAACTTCTCCGCCAACTCCGCCAACATCAGAGGCACCGTGCCGGAGTTCTTCACTTCTGATGTTTTCCCCAGTTTGTCCCTTTTGCACTTGGCCATCAACAACCTTGAAGGAACCTTGCCCTCCTCCTTTTCTGGCTCCCAGATTCAGTCTCTTTGGTTGAATGGGCAGAAGAGTGTCAACCGGCTCGGTGGCACTGTTGCTGTTTTGCGGAACATGACTTTCCTCACCGATGTTTGGTTGCATTCCAATGCTTTCTCGGGTCCCTTGCCTGATTTGTCCGGTTTGAAGTACTTGCGGGATTTCAGTTTGAGGGATAACAGGTTCACCGGTCCTGTTCCCCCTTCTTTGCTGCCTCTTAACTCGCTTCAAGTTGTCAACTTGACTAATAACTTGTTTCAGGGTCCAATGCCCGTTTTTGCTGCTGGGGTTCTGGTCGATAATAGTAAGGATTCCAATAGTTTTTGCTTGCCTACTCCTTCTAATTGTGATCCCCGGGTAGAGCTTCTTCTTTCTGTTGCAGGGCTTATGGGCTATCCTCAACGTTTTGCTGAGAGTTGGAAAGGGAATGATCCTTGTGCTGATTGGATTGGCATTACTTGTACTAATGGGAATATAACTGTTATTAATTTTCAGAAAATGGGACTTAGTGGGGAGATATCCCCCGATTTTTCACAGCTTAAATCGTTGCAAAGGATAGTATTAGCTGATAACAATCTTACTGGTTCAATTCCTCAGGAGCTTACTTCTTTGCCCGTGCTTACTCAATTGAATCTTGCAAACAATCGCCTTTATGGGAAGGTGCCTACTTTTAGGAGTAATGTAGTTGTGAGTATAACTGGCAATGTTGATATAGGGAAGGATAAGAGTAGCCAATCTCCTCAGGGTTCGGCATCTCCAATGGCTCCCAACGGGAAGGGACAAAGTGATGGAACTTCTGGAAATGGAGGCAAAAATTCTTCTCATGTGGGAATAATTGTCTTTTCCGTGATTGGGGCTGTGTTTGTGGTTTCCTTGATTGGTTTCTTGGTTTTCTGCTTGTTTAGGATGAAGCAAAAGAAGTTGAGCAGGGTCCAGAGCCCAAATGCGCTAGTTATTCATCCTAGGCATTCCGGATCAGATACTGAGAGTGTCAAGATAACTGTTGCTGGTTCAAGTGTCAGTGTTGGTGCTGCTAGTGAAACACAAACGGTACCCGGCAGTGAGGCAGGAGATATTCAAATGGTCGAAGCTGGAAACATGGTCATTTCCATACAAGTTCTGAAGAATGTCACTGACAATTTCAGTGAGAAGAATATATTGGGGCAAGGAGGTTTTGGAACTGTTTATAGAGGAGAACTCCATGATGGTACAAGAATTGCGGTGAAAAGAATGGAGTGTGGGGCAATAACTGGGAAGGGTGCAGCAGAATTCAAGTCCGAAATTGCTGTTTTGACAAAGGTACGCCACCGGCATCTTGTTGCTCTTCTTGGTTACTGCTTGGACGGGGATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGAACCCTAAGTAGGCATCTATTTAACTGGCCAGAGGAAGGACTGGAACCACTGGAGTGGAATAGAAGATTGACCATTGCCTTAGATGTCGCAAGGGGTGTTGAGTACCTCCATGGCTTGGCTCATCAAAGCTTCATACATAGGGATTTGAAACCTTCAAATATTCTTCTTGGAGACGATATGAGGGCAAAGGTTGCTGACTTTGGTCTTGTCCGGCTTGCTCCAGAAGGAAAAGCCTCTATAGAAACAAGAATAGCAGGAACTTTTGGATATTTGGCTCCCGAGTATGCAGTTACTGGTCGTGTGACAACTAAAGTGGATGTGTTCAGCTTTGGGGTAATATTAATGGAGCTGATAACAGGAAGAAAAGCACTTGATGAAACCCAACCCGAGGATAGCATGCATCTTGTAACATGGTTCCGCAGAATGTCCATAAACAAGGACTCATTCCGTAAGGCCATTGACTCAACAATTGAACTCAACGAGGAGACGCTTGCTAGTATTCACACAGTAGCAGAGTTAGCCGGCCATTGCTGTGCAAGAGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAATGTGCTCTCTTCTCTTGTAGAACTCTGGAAACCATCCGATCTGAATTCTGAAGATATATTTGGCATTGACCTTGACATGTCCCTACCACAAGCACTTAAGAAATGGCAGGCTTATGAAGGTAGAAGTCAAATGGAGTCATCTTCTTCGTCTTCACTTCTGCCAAGCTTGGATAATACACAGACAAGTATACCTACTCGCCCATATGGATTTGCTGATTCTTTCACATCAGCGGATGGAAGGTGATCATGCTTGGTTGTAAATATTTGTAAGGTATTTCTTTAGTGTGTATGTTTATTCTCCAGTCCTTACCTCTTGCTGGCTTTTCTTTTTGAACTTGTTTATCTTTTTTCCTGGTGTAGTTCTCCTCCATGATTAATTTTACACCATCTTTAGCACTTGTTAAGTTCTTTTACTGACAAACTGGGAAGAGATTCTCAGCTGATTTTTCATCATCTCACATTCATGTATTTTTCTCCTTTTAAGTTGATTTTGAGATGTGTAAATCAAATATCACTATTGAACCAACTTGGTAGCTTTAGCAGTGTGATTAGTTTGTTTTAATTACATTACATTACACTTGTTGAACCAACTTGGTTGTAAGTTGTATTACTAGCATGTAGATGACAGATGACAAATGACACATGAGGATCGACTCGTAACAGCTGGCACCATTTTGAAAGTCCGCACTTGAATTTTGTTTCATTTTATGCGAGGGAGATTTCAAAATTATGAGAATAGAACTTTATGGCTACATTCCACAAGGTTTCTGTCAAATCGAAGTTGCAGGGAATCTGGCGTTTATGAAGCCGTTTTGGATGAGCATGAATTTGTGAACTGGACAAAAT 3631 0.4492 MMNNSSILMITVTLSMMALFGGSQDDHSVMQALKDSLNPPGWSDPDSCKWDHMRCSDDKRVTRIQIGRLNLQGTLPASLQKLTQLQILELQYNNISGPLPSLAGLSNLRVFLASNNRFSAFPTDFFSGMSQLQAFEIDNNPFEPWDIPLSLRNASALQNFSANSANIRGTVPEFFTSDVFPSLSLLHLAINNLEGTLPSSFSGSQIQSLWLNGQKSVNRLGGTVAVLRNMTFLTDVWLHSNAFSGPLPDLSGLKYLRDFSLRDNRFTGPVPPSLLPLNSLQVVNLTNNLFQGPMPVFAAGVLVDNSKDSNSFCLPTPSNCDPRVELLLSVAGLMGYPQRFAESWKGNDPCADWIGITCTNGNITVINFQKMGLSGEISPDFSQLKSLQRIVLADNNLTGSIPQELTSLPVLTQLNLANNRLYGKVPTFRSNVVVSITGNVDIGKDKSSQSPQGSASPMAPNGKGQSDGTSGNGGKNSSHVGIIVFSVIGAVFVVSLIGFLVFCLFRMKQKKLSRVQSPNALVIHPRHSGSDTESVKITVAGSSVSVGAASETQTVPGSEAGDIQMVEAGNMVISIQVLKNVTDNFSEKNILGQGGFGTVYRGELHDGTRIAVKRMECGAITGKGAAEFKSEIAVLTKVRHRHLVALLGYCLDGDEKLLVYEYMPQGTLSRHLFNWPEEGLEPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMSINKDSFRKAIDSTIELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDLNSEDIFGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01519 939 MobiDBLite consensus disorder prediction 903 928 - -
Pste8g01519 939 FunFam receptor protein kinase TMK1 547 662 - -
Pste8g01519 939 CDD STKc_IRAK 591 864 - -
Pste8g01519 939 PANTHER OSJNBA0070M12.3 PROTEIN 9 939 - -
Pste8g01519 939 SMART serkin_6 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01519 939 MobiDBLite consensus disorder prediction 443 473 - -
Pste8g01519 939 Gene3D Ribonuclease Inhibitor 23 320 IPR032675 -
Pste8g01519 939 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Pste8g01519 939 SUPERFAMILY L domain-like 50 429 - -
Pste8g01519 939 Pfam Leucine rich repeat N-terminal domain 327 358 IPR013210 -
Pste8g01519 939 Pfam Leucine rich repeat N-terminal domain 24 56 IPR013210 -
Pste8g01519 939 MobiDBLite consensus disorder prediction 903 939 - -
Pste8g01519 939 Gene3D Phosphorylase Kinase; domain 1 545 662 - -
Pste8g01519 939 FunFam receptor protein kinase TMK1 663 880 - -
Pste8g01519 939 FunFam Leucine-rich repeat receptor-like kinase 322 445 - -
Pste8g01519 939 ProSiteProfiles Protein kinase domain profile. 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01519 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Pste8g01519 939 FunFam Receptor-like kinase TMK4 24 318 - -
Pste8g01519 939 Pfam Leucine rich repeat 381 421 IPR001611 GO:0005515
Pste8g01519 939 SUPERFAMILY Protein kinase-like (PK-like) 563 869 IPR011009 -
Pste8g01519 939 Gene3D Ribonuclease Inhibitor 322 446 IPR032675 -
Pste8g01519 939 Gene3D Transferase(Phosphotransferase) domain 1 663 878 - -
Pste8g01519 939 Pfam Protein kinase domain 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01519 Pste-Chr8 8427795 8432213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01519 70 867 Receptor kinase-like Gene Family AT5G07280 31.769 1.88e-83 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste8g01519 Pkinase 5.1e-46 CL0016