Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01515 AAGAAGAAGAAGAATGTGATTGGAGAAGAGGGAGAGGAAGGGGGGCAAACCACGTCGCATTCGAGATCTTCTTCTTCTTCGTCTTCGGATGAGAGAGAGTACGAGGTGCAGAACGTGCGCGAACGCTTAAAGTCCTCCAGAGGGAGCAGATTCGATCTAATAGAGAAGGAGTTGGAATTCAACTCCAATTGGAGCAGGTTCAGTCACCAAGCACTTCTCCATGGAATTCGATGCTTTTCCAAAGACTTCTTTAAACGCTTCGTTATTCATCCCGATAACAGGTGGTATCGAACATGGACAAAATTCATATTGCTATGGGCAGTGTATTCATCCTTCTTCACCCCAATGGAATTTGGATTTTTCCGAGGCCTGCCTGAGAATCTATTTATACTGGACATCATTGGACAAATAGCTTTTCTGGTCGATATTGTCTTGCAATTCTTTGTTGCTTATAGAGACAGTCAGACCTATCGTATGGTCTACAAGCGAACCCTTATCGCTCTGCGGTATCTAAAATCTAGCTTCATAATTGATCTTCTTGGATGTATGCCCTGGGATATCATCTACAAGGCTTGTGGACGGAGAGAGGAAGCGAGGTACCTTCTGTGGATCAGATTATATCGGGCGTGGAGAGTCACAGGTTTTTTCCATAGGTTGGAGAAGGACATACGTGTCAATTACATTATCACCCGGATTGTGAAATTGATAGTAGTTGAACTCTACTGCACCCATACAGCAGCCTGCATTTTCTACTATTTGGCTACTACACTTCCTGAATCCCAAGAAGGGTACACATGGATAGGAAGTTTAAAAATGGGTGACTATAGTTATTCACATTTCAGAGAAATTGATATTTGGAAGCGCTACACTACATCCCTGTATTTCGCTATTGTTACAATGGCTACAGTAGGTTATGGAGATATACATGCAGTAAATATGAGGGAGATGATATTCATAATGATATATGTTTCATTTGATATGATTCTTGGTGCCTATTTGATTGGTAATATGACGGCCTTGATAGTCAAGGGATCAAAGACAGAAAAGTTTAGGGACAAGATGACAGACCTTATGAAATATATGAACAGAAATAGGCTTGGAAGGGATATCCGTGAACAAATAAAAGGCCATGTGCGCTTACAGTATGAGAGTAGCTACACCGAGGCTTCTGTCATTCAGGATATCCCTATTTCTATTCGAGCTAAGATATCCCAAACATTATATTTACCATACATCGAAAAGGTTTCTCTTTTCAAAGGATGCTCTTCCGAATTCATCAATCAGATTGTCATTAGGGTCCATGAGGAGTTCTTTCTTCCAGGAGAAGTTATAATGGAACAAGGAAATGTTGTAGATCAACTATATTTTGTTTGTCATGGAGTACTGGAGGAAGTAGGCACATCAGAAGACGGGACTGAAGAAACTGTTTCACTTCTGCAGCCTGACAGCTCATTCGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCATATACTGTCCGCGTTTGTGAACTGAGTAGACTCCTGCGACTTGATAAACAATCATTTACAAATATCCTAGACATATACTTTTATGATGGAAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGAGTCTTTCCGAGGTAAGCAGTTGGAGTCAGAGATCACATTTCATATCGCAAAGCAAGAAGCTGAGCTTGCTTTGAAGGTCAATAGTGCAGCTTTTCATGGGAACCTTTATCAGCTAAAAGGTTTAATTCGAGCTGGAGCTGATCCCAACAAGAGAGATTATGATGGAAGGTCACCTTTGCATCTTGCAGCATCTAGAGGATATGAAGATATCACACTTTTCCTTATTCATGAGCGTGTAGATGTCAATATTAAAGATAACTTCGGGAACACACCCTTACTTGAAGCAGTTAAAAATGGACATGATCGGGTTGCTTCTTTACTTGTTAGAGAGGGAGCCTCTTTGAGGATCGAAAATGCTGGTAGTTTTTTATGCACGGCAGTTTCAAGGGGAGATTCAGAATATCTTAGAAGACTTTTATCCAATGGCATGGATCCTAACTTAAAAGATTATGATTACCGAAGCCCTCTTCATATTGCCGCGGCTGAAGGTTTATTCTTCATGGCAAAGTTGCTAGTAGAAGCTGGAGCTAGTGTTTTTAACAAAGACAGATGGGGAAATACCCCAGTTGATGAAGCCCGGATGTGTGGAAATAAGAATCTAATCAAGCTACTGGAAGATGCAAAATCTGCTCAACTGTCAGAATTCCCATATAGGGCCGAAGAATTTAAAGATAAAATACATCCAAAGAAGTGCACAGTGTTCCCTTTCCACCCGTGGGATCCGAAAGATAATAGAAGACATGGAATTGTATTATGGGTTCCACACTCTATTGAAGAGCTAATCAAATTAGCAGAAGAACAAATAGAATTTTCTGGGGATTCTTGTTCTTGTATTTTATCAGAAGAGGCAGGTAAAATTACTGATGTGGACATGATTAAGGATGGCCAAAAGCTGTATTTAGTCCAAGAAACACATGATTAGGTTCCATATTATGACTCTTTACAGCCATATAATATAGTGCCTTGTAATGTGTTGTGTTTTCTAGAAATTAGCACGTTATTTGATCTTATTAATCATGCAAAAAAGTGTCGTATCTTGTCAAAATACAGGCGAGTAATTAAGATCAAATAATGTGCTTCCATCTGCATTATGCTTTAGTGGCACCACCGCACCATTTAAAGGAGTCTCCATC 2749 0.3994 KKKKNVIGEEGEEGGQTTSHSRSSSSSSSDEREYEVQNVRERLKSSRGSRFDLIEKELEFNSNWSRFSHQALLHGIRCFSKDFFKRFVIHPDNRWYRTWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRMVYKRTLIALRYLKSSFIIDLLGCMPWDIIYKACGRREEARYLLWIRLYRAWRVTGFFHRLEKDIRVNYIITRIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKMGDYSYSHFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHVRLQYESSYTEASVIQDIPISIRAKISQTLYLPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGTSEDGTEETVSLLQPDSSFGEISILCNIPQPYTVRVCELSRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFRGKQLESEITFHIAKQEAELALKVNSAAFHGNLYQLKGLIRAGADPNKRDYDGRSPLHLAASRGYEDITLFLIHERVDVNIKDNFGNTPLLEAVKNGHDRVASLLVREGASLRIENAGSFLCTAVSRGDSEYLRRLLSNGMDPNLKDYDYRSPLHIAAAEGLFFMAKLLVEAGASVFNKDRWGNTPVDEARMCGNKNLIKLLEDAKSAQLSEFPYRAEEFKDKIHPKKCTVFPFHPWDPKDNRRHGIVLWVPHSIEELIKLAEEQIEFSGDSCSCILSEEAGKITDVDMIKDGQKLYLVQETHD 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01515 845 FunFam Gated outwardly-rectifying K+ channel 632 758 - -
Pste8g01515 845 ProSiteProfiles Ankyrin repeat region circular profile. 690 722 - -
Pste8g01515 845 Pfam Cyclic nucleotide-binding domain 437 521 IPR000595 -
Pste8g01515 845 ProSiteProfiles cAMP/cGMP binding motif profile. 417 537 IPR000595 -
Pste8g01515 845 SUPERFAMILY cAMP-binding domain-like 345 534 IPR018490 -
Pste8g01515 845 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515
Pste8g01515 845 ProSiteProfiles Ankyrin repeat region circular profile. 593 625 - -
Pste8g01515 845 Pfam Ion transport protein 97 342 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste8g01515 845 PANTHER POTASSIUM CHANNEL AKT1 68 841 IPR045319 GO:0005249|GO:0006813
Pste8g01515 845 ProSiteProfiles Ankyrin repeat profile. 657 689 IPR002110 GO:0005515
Pste8g01515 845 Gene3D Helix hairpin bin 344 400 - -
Pste8g01515 845 Gene3D Jelly Rolls 401 538 IPR014710 -
Pste8g01515 845 SUPERFAMILY Voltage-gated potassium channels 90 342 - -
Pste8g01515 845 SUPERFAMILY Ankyrin repeat 566 745 IPR036770 -
Pste8g01515 845 CDD CAP_ED 417 531 IPR000595 -
Pste8g01515 845 Gene3D - 550 658 IPR036770 -
Pste8g01515 845 ProSiteProfiles Ankyrin repeat profile. 626 658 IPR002110 GO:0005515
Pste8g01515 845 SMART cnmp_10 417 535 IPR000595 -
Pste8g01515 845 PRINTS Ankyrin repeat signature 706 720 IPR002110 GO:0005515
Pste8g01515 845 PRINTS Ankyrin repeat signature 594 609 IPR002110 GO:0005515
Pste8g01515 845 Pfam KHA, dimerisation domain of potassium ion channel 768 839 IPR021789 -
Pste8g01515 845 FunFam Potassium channel SKOR 97 342 - -
Pste8g01515 845 PRINTS EAG/ELK/ERG potassium channel family signature 289 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g01515 845 PRINTS EAG/ELK/ERG potassium channel family signature 132 142 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g01515 845 PRINTS EAG/ELK/ERG potassium channel family signature 241 251 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g01515 845 PRINTS EAG/ELK/ERG potassium channel family signature 333 342 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g01515 845 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
Pste8g01515 845 Gene3D - 659 753 IPR036770 -
Pste8g01515 845 FunFam Potassium channel KAT2 405 542 - -
Pste8g01515 845 ProSiteProfiles KHA domain profile. 769 845 IPR021789 -
Pste8g01515 845 Pfam Ankyrin repeats (3 copies) 568 655 IPR002110 GO:0005515
Pste8g01515 845 Pfam Ankyrin repeats (3 copies) 663 744 IPR002110 GO:0005515
Pste8g01515 845 Gene3D - 96 343 - -
Pste8g01515 845 SMART ANK_2a 723 753 IPR002110 GO:0005515
Pste8g01515 845 SMART ANK_2a 626 655 IPR002110 GO:0005515
Pste8g01515 845 SMART ANK_2a 558 589 IPR002110 GO:0005515
Pste8g01515 845 SMART ANK_2a 690 719 IPR002110 GO:0005515
Pste8g01515 845 SMART ANK_2a 593 622 IPR002110 GO:0005515
Pste8g01515 845 SMART ANK_2a 657 686 IPR002110 GO:0005515
Pste8g01515 845 ProSiteProfiles Ankyrin repeat region circular profile. 626 657 - -
Pste8g01515 845 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01515 Pste-Chr8 8344420 8354889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01515 664 743 Ion Channels AT5G37500 33.333 5.26e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01515 8 8344420 8354889 Pste8g01515 8 8344420 8354889 ECH