Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01496 GGGGAGATGAGCTGCTTTTGTTCGCGTACTCGTGGGAAAGATGTGGGCTTTGATATAGGGTCAAACCAGAAAGGGTCAGCCACGAGTTTCAGTTTTCGCGAGCTTGCAGCGGCAGCCAGGGGTTTTAAGGAAATGAATTTGATTGGGGAAGGAGGTTTTGGAAAGGTTTACAAGGGTCGTCTCTCTACGGACCAGCTTGTGGCTATAAAACAATTGCGTCTAGATGGTGAAAGTCATCAGGGTAATCGGGAATTTGTCACCGAGGTTCTTATGTTAAGCCTCCTACACCATTCTAATCTCGTTAAATTAATTGGTTACTGCACCCATGGAGATCAAAGGCTTTTGGTTTATGAATACATGCCTATGGGAAGCCTCGAACAGCACCTTTTCGATCCTAACCCTGAGAAAAAAGCACTAAGTTGGAGAACTCGACTGAAGATTGCTGTGGGAGCTGCTCGGGGCCTCAAGTATCTCCATTGCGCAGCAAATCCACCAGTTATCTATCGAGACTTGAAATCTGCCAATATCTTATTAGATAATAATTTAAACCCCAAACTCTCAGATTTTGGGCTTGCTAAACTAGGACCTATTGGAGACAATACGCATGTTTCCACCCGAGTCATGGGAACATATGGCTATTGTGCCCCCGAATATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACAGCTTTGGTGTGGTCCTGCTAGAGTTGATCACAGGACGGAAGGCAATGGATGCCACTAGAAGACCACGCGACCAAAGCTTGGTTGCATGGTCTCGCCCATTTTTGAGTGACAGGAGAAAACTTTCCCAAATCGTTGATCCTCGATTGGAAGGAAACTACCCTTTACGTTGTTTGCACAATGCAATTGCTATTACTGCAATGTGCCTCCAGGAGCAACCGAATCTTCGTCCATCCATTGGTGATATTGTTGCTGCACTCGAGTACTTGGCATCTGAAAGTGTTTCAGAAGTCATCAAGCGTAGTAAAGCGCTGCCCACTACCGCAACCACAATCAGAAACTGAAACAGATAGAAACTAG 1051 0.4529 GEMSCFCSRTRGKDVGFDIGSNQKGSATSFSFRELAAAARGFKEMNLIGEGGFGKVYKGRLSTDQLVAIKQLRLDGESHQGNREFVTEVLMLSLLHHSNLVKLIGYCTHGDQRLLVYEYMPMGSLEQHLFDPNPEKKALSWRTRLKIAVGAARGLKYLHCAANPPVIYRDLKSANILLDNNLNPKLSDFGLAKLGPIGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDATRRPRDQSLVAWSRPFLSDRRKLSQIVDPRLEGNYPLRCLHNAIAITAMCLQEQPNLRPSIGDIVAALEYLASESVSEVIKRSKALPTTATTIRN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01496 344 CDD STKc_IRAK 48 318 - -
Pste8g01496 344 FunFam Serine/threonine-protein kinase CDL1-like 16 119 - -
Pste8g01496 344 ProSiteProfiles Protein kinase domain profile. 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01496 344 PIRSF ILK 21 333 - -
Pste8g01496 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pste8g01496 344 Gene3D Transferase(Phosphotransferase) domain 1 120 339 - -
Pste8g01496 344 SMART serkin_6 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01496 344 SUPERFAMILY Protein kinase-like (PK-like) 25 317 IPR011009 -
Pste8g01496 344 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Pste8g01496 344 Pfam Protein kinase domain 42 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01496 344 PANTHER OS07G0668900 PROTEIN 22 326 - -
Pste8g01496 344 FunFam Serine/threonine-protein kinase PBS1 120 334 - -
Pste8g01496 344 Gene3D Phosphorylase Kinase; domain 1 18 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01496 Pste-Chr8 8205345 8206805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01496 26 322 Glycoside Hydrolase AT3G07070 61.409 1.02e-134 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste8g01496 Pkinase 2e-50 CL0016