Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01487 GGAGAAGGAAGTAGGGGTAGTATATATATGGTGGAGAGTTGGGAAAGGAAGAAATAAGAGGGATTGGAAAATTGGTGATAGATAAGGAGAGGAGAAGAGAGATGGAGGAGAAGATAGACGGAAGAAGTGGATTCTGCAGGTCGAATTCAATATTCTACAGCAAGCGTAAGGGACTGGCAGTGCCTCCGAACAACGAAATAGACGTGACGAGATTCATAGCATGCAGGGCGCACAGGGGGAGAAGAGCCTTGATAGAGGCGGGGAGCGGGAGGGAGGTGAGCTACAAGGAGCTATGGAGAGCGGTGGAGGGCGTGGCAGAGAGTCTATGGGAGATGGGGATAAGAAAGGGAAACGTGATCCTCATCCTATCTCCAAACTCCATACACTTCCCAGTAGTGTGCCTGGCAGTAATGTCCCTGGGAGCCATCATAACCACCACAAACCCCCTCAACACAACTCCCGAAATTTCCAAGCAGATCGCCGACTCCAAGCCCCTCCTGGCGTTCACTATCCCTCCCTTGCTCCCCAAACTCACCGCAGCAGCCCCTCTCTGCCAATCGTTCTCATGGAGATCGAGGGTCCGCCCCCCCCCAATATTCTCACCACTCTCCACCACATGGCCAAGAAGGAACCCGCTGCTCTCCGCCTGCGTGACCGCGTCCACCAGGACGACACGGCCACTCTTCTCTACTCCTCCGGCACCACTGGACCCAGCAAGGGCGTCCTCTCCTCTCACCGGAACCTCATTGCCATGGTCCAAATCGTCCTCGGTCGCTTCCACTTTGAGGACCACGAAACCTTCATCTGCACGGTGCCCATGTTTCACATATACGGCCTCGTTGCCTTCGCCACCGGCCTCCTCGCTTCCGGCTCCACCATCGTCGTCCTTTCCAAGTTCGAGATGCACGACATGCTTTCCGCTATTCAGACCTTCCGTGCCACCTACCTCCCCCTCGTCCCCCCCATTCTCGTCTCCATGCTCAACAACGCCCCCTCCATTAAGGCAAACTACGACTTGACCTCCCTCCATTCCGTCCTCTCCGGTGGTGCCCCCTTGAGTAAGGACCTCATTGAGGGCTTTCTCCTCAACTTCCCCAACGTCACCATTCTTCAGGGTTATGGTTTGACCGAATCCACCGGCGTCGGCTCCTCCACCGACTCCTTGGACGAGAGTCGCCGTTACGGCACTGCTGGCCTCTTGTCTCCGGCCACCCAGGCTATGATTGTCGACCCTCTCTCCGGCCAATCGCTTCCTGTTAACTGCACCGGGGAGCTCTGGCTCCGGGGTCCCACCATCATGAAAGGTTATTTTAATAACGAAGAAGCAACCAGATCGACCCTTGATTCAAAAGGATGGTTAAGAACGGGGGATGTTTGTTACATTGACAGTGATGGATTCATATTTATTGTGGATAGGTTAAAAGAGCTCATCAAATACAAGGGATATCAGGTGGCTCCAGCGGAACTAGAGGCCTTGTTGCTGACTCATCCTGCTATTTTAGATGCTGCTGTTATCCCGTATCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATACGTGGTGAGGAAATCTGGAAGTAGCTTATCAGAAAGCCAAGTTATGGATTTTGTTGCAGGACAGGTGGCTCCTTACAAGCGAATTCGAAAAGTGGCGTTTATATCCTCCGTACCCAAAAATTCATCTGGCAAAATTCTTCGGAAGGATCTCATCAAGCTTGCAACGTCTAAACTCTGA 1735 0.5303 MQGAQGEKSLDRGGEREGGELQGAMESGGGRGRESMGDGDKKGKRDPHPISKLHTLPSSVPGSNVPGSHHNHHKPPQHNSRNFQADRRLQAPPGVHYPSLAPQTHRSSPSLPIVLMEIEGPPPPNILTTLHHMAKKEPAALRLRDRVHQDDTATLLYSSGTTGPSKGVLSSHRNLIAMVQIVLGRFHFEDHETFICTVPMFHIYGLVAFATGLLASGSTIVVLSKFEMHDMLSAIQTFRATYLPLVPPILVSMLNNAPSIKANYDLTSLHSVLSGGAPLSKDLIEGFLLNFPNVTILQGYGLTESTGVGSSTDSLDESRRYGTAGLLSPATQAMIVDPLSGQSLPVNCTGELWLRGPTIMKGYFNNEEATRSTLDSKGWLRTGDVCYIDSDGFIFIVDRLKELIKYKGYQVAPAELEALLLTHPAILDAAVIPYPDKEAGQYPMAYVVRKSGSSLSESQVMDFVAGQVAPYKRIRKVAFISSVPKNSSGKILRKDLIKLATSKL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01487 504 SUPERFAMILY Acetyl-CoA synthetase-like 113 501 - -
Pste8g01487 504 Gene3D - 95 401 IPR042099 -
Pste8g01487 504 MobiDBLite consensus disorder prediction 1 81 - -
Pste8g01487 504 MobiDBLite consensus disorder prediction 33 51 - -
Pste8g01487 504 FunFam 4-coumarate--CoA ligase 2 402 503 - -
Pste8g01487 504 Pfam AMP-binding enzyme 133 406 IPR000873 -
Pste8g01487 504 ProSitePatterns Putative AMP-binding domain signature. 155 166 IPR020845 -
Pste8g01487 504 Gene3D - 402 503 IPR045851 -
Pste8g01487 504 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 137 498 - -
Pste8g01487 504 Pfam AMP-binding enzyme C-terminal domain 415 490 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01487 Pste-Chr8 8147353 8150024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01487 98 504 Monolignol Biosynthesis Gene Families AT1G20500 61.483 0.0 528
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01487 8 8147353 8150024 Pste8g01487 8 8147353 8150024 ECH