Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01485 ATGTTTTGTGTTAATGCATATATTTTAGGTGATTAGTGTTTAGCTAGTAGTAGCACCGTCTCCTTCTGGAAAGATCATAAACCCGAAAATCCATCTCCGCTGAATCGCGTTGCGGCTACTTTGGGATCTTGTTGTCTGTGTTAGTTCTGTCCAATTCCTTGGTCCAAGACTCGGCATCTGAACCAACAGCATGACGGGTCAGTGCTCCAATGAAGGCTCCAGTACTGGAAGTATTTCAGCAGAATGTTCAGATTCAATTGTCCAGCTCAATATCAAGACTCTCGATTCCCGTATCTACAGTTTTCAAGTGGACAAAAATATGCCTGTTTCGTTGTTCAAAGATAAAATTGCAAATGAAATTGGTGTTCCAGTTAGTCAGCAGCGGCTGATTTTTAGAGGAAAAGTTTTAAAGGATGAGCATGTTCTTTCTGAGTATCATGTTGAGAATGGGCATACATTGCATTTAGTAGAAAGACAACCAAATCAATCGCAGGCTTCTGGTACAAGTTCTGGTGAGTCAACTGGTACAAGTGGCAACAGAGGAAACGATGTAGGCTCAGGGTCTCCTCGTAACCGTGTTGGGCAAATTTCACACAGTGTTGTTCTTGGAACATTTAATGTGGGGGAACAAGGTGAAGGAATTGTTCATGACCTCACCCGGGTTATTGGACATGTTTTAAATTCTATTGGAAACGGAGGCCAGAGCACAGTTAGTGGTCCTAATGCTATGCAAACTTCTTCAGCTCACCCAGGGAATGAAACTGAAGGAATGCATACTGGAATTCAAAACCCAGCAGGAAATCAGGCACCATCTGGACAGACATTTCATGGTCCGACATTCCAATCTGTGTCTCATGTTGTTCAGATTCCTGTGACGGCAGGAGCCATACCCCTTCCTTCTTTCAATGCTCCAATTCCTGATTCATTGAACACACTGTCTGAGTTTATGAATCGCATGGAACAGACACTAACAGAAAATGGTTATCAGCCAAATCTCTCACATGCTAACTCTGGAGATCAGCAAGTCGAATTGCCTTCTAATGCACAAGGGTTGCCAACACTGGAAGCATTGAGCACTGTCTTACATCGTGCAGAATGGTTGCTTGGTGGTCAGGCTGTTGCTGCACTATCTCATATTGCAGGGCGCTTGGAAAGAGAAGGAACATCTGATGATCTACGTGTAAGAGGTCAAATACAGTCAGAGTCAGTGCAAATAGGACTTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTTGGCCGAACAATGTTGACACTACGCATGGGACAATCTTCTGCAGAATCTGTTGTTAATGCTGGACCAGCAGTTTACATTTCTCCATCAGGGCCAAATCCTATAATGGTGCAGCCTTTTCCCCTTCAGACAAGCTCCCTCTTTGGTGGTCCAGTTCCCTCATCAACTCCTGCAGCTTTAGGCACCATTGGTATTGGAAATGCTCCTAGGAATGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTGTTTCAGCAATGGGTTCTAGGGCAAATAATGGAGAAGGGACAAGAAGTGAACACCGTAATGAACCTGGCTCTGGTGATCCAGGTTCAACACGGGTGTTACCTGTTAGAAATGTCATAGCAGCAGCTATCCCATCACAGCCTCCTGGTGTTGGAGTCACTAGTAGTGCACAAACTGGGTTTGGTGTTTCTACATCACAACCACCTTCAGATTCAGCTTCATTGTCATCTGTTTTAGCTGAAATCAATTCTCGCCTTAGGAATGTTGTTGGTAATATGCAAGGAGAAAGCACAGTTCCATCAGGTCAAATGGAATCAAATAGCAGGGACTTGTCTTCTGGATCTGAATCAAGACCTGCTACAGTAAATGAACAGCAAGATACCGTGGACACAAATGGTTTTGGGGCTGCTGGTGCATCCTCAGTTGGCAGCACTTCTGAAAGTGAAGTACAGAAGCTCCAAACTGAGACAGTCCAAACCTCTAGTAATGATGAGAGAGATGTTTTGGTTGACAAATTTGTTTCAAGCTCTTCCAACCAAGATTTACAAGGTAGTTCTAGTGGAGAAACAATAGTAAAACCAGAAAAAGAACAAGATATTCTGGCTGAAAGACAGGATGTAACTGAACCTACCAAAGCTGCTCCCCTAGGATTGGGTGTGAGTGGTTTGGAGCGTAAGAGGCGAACTAGACTTCAACCTCCAGTAAGTAAAGGTGTTGATGATGGATCATCCAGTTCTTCTGTCAATCAAAATCAGCAAACAATAACAAGTGGTCAACATATATTGCAAACTCTTGCAAGCCATGGATCTGCTTTGAACTCAAGAAATGCTAATGTGCCATCCCAGCAGTCCTTGCCCTCCAGTGATCGCCCAATTGATGTGGCTGGTTTAATGTCTCAGGCTTTACATAGTCCTGCTTTGAATGGTTTGTTGGAAGGAGTTTCACAGCAAACTGGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAGCAGTTCACACAGAGCCCACAACTAATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATGTGGGGAATATGTTTGCTGGAACAGAAAGAGCGCAAGGTGGTGGTATTGACATTTCAAGGATGTTTCAACAGATGATGCCTATTGTATCTCGAGCCCTTGGTGGGGGGAATTCTTCCTTGCTATTCTCCGCTGAAGAAGCAGAGCCCTGTGCACCCTACCAAGATGAAACAGTTAATAGAGATGATAATCAAAGTTTACAGCTTGACCTTCAACCACTGGCTGAGACGATTGAGCACCTGGGTCCTTCTACAGATATTTTCCGTGTTGTAGCTGAAAATGCTGTCCAGCGATATGGCAGTGGAAGCGCGTCTAATGATCTTCTGGATGAGTTATGCAGCAATGAGAGTCTTGCTAGGGAATATATAGATATGTTGCGATGTGATTTAAGTAAGCTGCTCGAGGGACGTTCTGAGCCGGATAAATTCTAATTCACAGCTTGTATGAATGCATATTTTTCTGCTATATTGCTTCTATTGTGTTCCAACTCTTAATCTTACTGAAATTCCTTCTAGAAAAATGAGTTTTTGGTGCTGTGCTCTAAAATAATTAATTGATCGTTAAGTGACCTGGATCATTTTGACGTACTTCCAGACCTGAAATTCCTTTAAATGTTGTCCATTTTGCGCTGAAAAACAACCGG 3210 0.4336 MTGQCSNEGSSTGSISAECSDSIVQLNIKTLDSRIYSFQVDKNMPVSLFKDKIANEIGVPVSQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQSQASGTSSGESTGTSGNRGNDVGSGSPRNRVGQISHSVVLGTFNVGEQGEGIVHDLTRVIGHVLNSIGNGGQSTVSGPNAMQTSSAHPGNETEGMHTGIQNPAGNQAPSGQTFHGPTFQSVSHVVQIPVTAGAIPLPSFNAPIPDSLNTLSEFMNRMEQTLTENGYQPNLSHANSGDQQVELPSNAQGLPTLEALSTVLHRAEWLLGGQAVAALSHIAGRLEREGTSDDLRVRGQIQSESVQIGLAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPVPSSTPAALGTIGIGNAPRNVNIHIHAGTSLAPIVSAMGSRANNGEGTRSEHRNEPGSGDPGSTRVLPVRNVIAAAIPSQPPGVGVTSSAQTGFGVSTSQPPSDSASLSSVLAEINSRLRNVVGNMQGESTVPSGQMESNSRDLSSGSESRPATVNEQQDTVDTNGFGAAGASSVGSTSESEVQKLQTETVQTSSNDERDVLVDKFVSSSSNQDLQGSSSGETIVKPEKEQDILAERQDVTEPTKAAPLGLGVSGLERKRRTRLQPPVSKGVDDGSSSSSVNQNQQTITSGQHILQTLASHGSALNSRNANVPSQQSLPSSDRPIDVAGLMSQALHSPALNGLLEGVSQQTGVDSPDGLRNMLQQFTQSPQLMNTVNQIVQQVGSQDVGNMFAGTERAQGGGIDISRMFQQMMPIVSRALGGGNSSLLFSAEEAEPCAPYQDETVNRDDNQSLQLDLQPLAETIEHLGPSTDIFRVVAENAVQRYGSGSASNDLLDELCSNESLAREYIDMLRCDLSKLLEGRSEPDKF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01485 935 FunFam Large proline-rich protein BAG6 16 109 - -
Pste8g01485 935 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Pste8g01485 935 MobiDBLite consensus disorder prediction 677 691 - -
Pste8g01485 935 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 933 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 484 515 - -
Pste8g01485 935 Gene3D - 14 108 - -
Pste8g01485 935 SMART ubq_7 24 95 IPR000626 GO:0005515
Pste8g01485 935 MobiDBLite consensus disorder prediction 532 691 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 488 515 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 711 728 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 168 213 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 611 630 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 532 603 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 631 645 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 93 130 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 711 730 - -
Pste8g01485 935 MobiDBLite consensus disorder prediction 445 471 - -
Pste8g01485 935 CDD Ubl_ubiquitin_like 26 93 - -
Pste8g01485 935 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Pste8g01485 935 SUPERFAMILY Ubiquitin-like 19 98 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01485 Pste-Chr8 8123210 8134427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01485 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.11e-10 58.5