Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01483 GTGACACCCACCACCCTCCCCTTACGCCACTCAGACTCAGTGCTAACTCTCGCTTTTAATTTTTTTCATTTCTCAGCTAAACGGAACCACACTCCCATGGCGCCAATTCCCTAACCAACCGGCTTTCCTCGTACAACTGGAATCGCCAAAATGAAGTCCGAACGGGTCAGACAACCAATTGTGGTCACTTTCTTAACGTGCTTCTTTGCCATTGTAGGTTCGGATCTAGCATCGGACAGAGCGGGGCTGTTGGTGCTCCGAAGCGCGGTGGGGGGACGCACGCTGTTATGGAACACCACCCAAACAAGCCCTTGTTTATGGACCGGCGTGCTCTGCGCCAGTGGGAGAGTAACCATGCTGCGTCTCCCCGCGATGGGACTGTCCGGTTCGCTCCCCTCCGGTTTGGGCAACCTCACCCAACTTCAGACACTTTCTCTCCGGTTCAACGCACTTACCGGACCAATCCCCTCCGATTTCGCCAACCTCAAGGCTCTTCGGAACCTTTACTTGCAGGGAAACTTCTTCTCCGGCGAGCTTCCGGATTCGTTGTTCGCTTTGCCGAATTTGGTGAGGTTGAATTTAGGTAACAACAATTTCACCGGCGAGATTTCCCCCAACTTGAATGCTCTCACTCGTTTGGCCACTCTTTATTTAGAACGCAACAATTTCACTGGCTCTATCCCTGACCTTCCTGTTCCACCTCTCGATCAGTTTAACGTCTCGTTTAATTCCTTAACCGGATCCATTCCCAACCGCTTTTCTCGTTTCAGTCAATCCTCTTTCATCGGAAACTCTCTCTGCGGGACCCCCTTACAACTTTGCCCTGGAACCCATGATACAAGTAATCAGTTATCCGCTGGAGCCATTGCGGGTGTTGTCATTGCTTGTGTTTTTGCTCTCTTCTTCATTCTGCTCCTTTTGTTCGTTTTCTGTAGAAAAAGGAAAAAGACAAATGAAACCGTGCCTCCTGAGAAGCGTCTTGTGGAAGGTGAACTTTCTCGTGATAAGAGTGCCCACACCAGTGCCAATTCAGCTTCTGCGGTGGCTGGTTCGGTTGAGAAGAGTGAGGTTCGTAGTAGCAGCGGTGGGGATAGTAAGAGTTTGGTTTTTTTCGGGAATGTGAATAGAGTGTTTAGTTTGGATGAGTTGTTGAGAGCTTCTGCGGAGGTTCTAGGTAAGGGCACATTTGGAACCACTTATAAGGCCACTTTGGAGATGGGGGCGAGTGTGGCTGTGAAGAGGTTGAAGGATGTTACTGCTGCAGAGAGGGAATTCAGGGAAAAGATTGAACAAGTGGGGAAGATGGTTCATCACCACTTGGTCCCACTTCGGGGTTATTACTTTAGCAGAGATGAGAAGCTTGTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGCAAATGGTGGAGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCCGCCATTGCCCTTGGTGCTGCCCGTGGGATTGAATACATTCATTCACATGGCCCAACATCTTCCCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAAACTTTTGAAGCTCGTGTCTCTGACTTTGGCCTAGCTTACCTTGCTCTCCCAACCTCTACACCAAACCGTATTTCTGGTTACCGTGCCCCAGAGGTCACTGATGCGCGCAAAGTATCCCAAAAAGCAGATGTATATAGCTTTGGTATCATGCTTTTGGAGCTGCTTACGGGGAAGGCTCCAACTCATTCTTCACTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTCCAATCTGTGGTTCAAGATGAGTGGAACACTGATGTATTTGACGTGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTCAAGCTCTTGCAGCTCGCCCTTGAATGTACTGCTCAATATCCTGACAAGAGACCTTCAATGGATGAGGTGGCGATGAAGATTGAAGAAATTTCTCATCCTAGTTTAGAGAAAGAGAAAGGGAAGAATCATGATGTTAAAGATGCTGATAATGGATTCTCCCAACAGTACTATTCTGTTGACTCGGGTGTGTCACAAGCTTGAATACAGAATTGAAGAAAGACCACATTATTTCATCGTTGGACACCCAAGCTTGAATATAGAATTGAAGACAGACCTCATTATTTCATCTTTGCCCTGTTTTTGGCATGCATATTACACAAGTGATGTTTGTTTGTTTGTTTATTCATTGAGGGATTATAGAAACCAGTTGTGTATGGCCTTTGTCTTACACTCTTACTACATTATTCTCCTTAGTCACTTTTGTTATTCTGAGTCGTGGTTGGGGGTTTCTATTCCCCACTTTATTTACTACTTCATTATATTCCTG 2359 0.4688 MKSERVRQPIVVTFLTCFFAIVGSDLASDRAGLLVLRSAVGGRTLLWNTTQTSPCLWTGVLCASGRVTMLRLPAMGLSGSLPSGLGNLTQLQTLSLRFNALTGPIPSDFANLKALRNLYLQGNFFSGELPDSLFALPNLVRLNLGNNNFTGEISPNLNALTRLATLYLERNNFTGSIPDLPVPPLDQFNVSFNSLTGSIPNRFSRFSQSSFIGNSLCGTPLQLCPGTHDTSNQLSAGAIAGVVIACVFALFFILLLLFVFCRKRKKTNETVPPEKRLVEGELSRDKSAHTSANSASAVAGSVEKSEVRSSSGGDSKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGASVAVKRLKDVTAAEREFREKIEQVGKMVHHHLVPLRGYYFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIEYIHSHGPTSSHGNIKSSNILLTKTFEARVSDFGLAYLALPTSTPNRISGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSVVQDEWNTDVFDVELLRYQSVEEEMVKLLQLALECTAQYPDKRPSMDEVAMKIEEISHPSLEKEKGKNHDVKDADNGFSQQYYSVDSGVSQA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01483 640 ProSiteProfiles Protein kinase domain profile. 335 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01483 640 MobiDBLite consensus disorder prediction 275 299 - -
Pste8g01483 640 FunFam Probable inactive receptor kinase RLK902 26 181 - -
Pste8g01483 640 Gene3D Ribonuclease Inhibitor 182 228 IPR032675 -
Pste8g01483 640 MobiDBLite consensus disorder prediction 604 640 - -
Pste8g01483 640 FunFam Probable inactive receptor kinase At1g48480 410 612 - -
Pste8g01483 640 SUPERFAMILY L domain-like 47 208 - -
Pste8g01483 640 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Pste8g01483 640 FunFam pollen receptor-like kinase 1 304 409 - -
Pste8g01483 640 MobiDBLite consensus disorder prediction 623 640 - -
Pste8g01483 640 Gene3D Phosphorylase Kinase; domain 1 301 409 - -
Pste8g01483 640 MobiDBLite consensus disorder prediction 604 622 - -
Pste8g01483 640 PANTHER OS05G0588300 PROTEIN 11 608 - -
Pste8g01483 640 Pfam Protein kinase domain 338 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01483 640 CDD STKc_IRAK 341 604 - -
Pste8g01483 640 SUPERFAMILY Protein kinase-like (PK-like) 339 600 IPR011009 -
Pste8g01483 640 Gene3D Transferase(Phosphotransferase) domain 1 410 629 - -
Pste8g01483 640 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Pste8g01483 640 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01483 Pste-Chr8 8111502 8114663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01483 25 604 Receptor kinase-like Gene Family AT1G48480 57.724 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g01483 Pkinase 2.4e-36 CL0016