Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01442 GTGTTCCCTGGTGTGTGTTCTACCTTCTGTCATCTTCAGTCTTAAAAACACAAAATTCTCTTCCTGAATTCTCACCACCAATTCGTGCTCTATATTATAAACATTTTGCCATAAGGCAGGGTCATCGTCATCACACTCCCACTTCCATCCTCACCCATGATTACCAACTTTTCTTCACCTTCTCTCAGTCTGATGCAACCTCACATTAGTCCAATTTCAATTTTTCTAACACAGCCCCACCCACTTCCCTTCTTTCTCTCTTCTCTTCTGTGCAGTTGAGAAAAATATATGCTCCAACCAACAAGCAAAGAAGCTTCTCCTTACTTTTCTTTATCTTTTTTCTCTGACCCTTTTGTTCTCTCTACTTCATGATGAGTTTGTGTTCCTCTCAAGGAAACTGTTCTGGTGACTCCAAGGTTGTTTCCAATGCACACGTTACCTCTGCAATTGGAAATGACTCTTCTGACTACAAAAGTAACAAACTCATAACCTTTTTGAAAAAAACCATGTGGGATTTTGCTTTGGCATGTGCTGGTTTTGTTCCTTGCGGTGCCAATAACGACCTTAACGGTCAAAGGAAGACAGCTTTGGAGCATAACAAGGCGTGGTTGCTGGAGGAGTCTGGAGCAGAATTGGCAAGTGCTGACCCTCAATCGGTTCACTCATCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTATTCTGCTTCTGCTGCTGCTGCCGCAACCTTTTTGATGGTGAATTTGGAATATGAATCTCAAGTGAAGGAGATGAAATGGAGGAGAATACAGCCACTGGAGAAAAGCGTTTCTCCAGTTGTAAACACTTTGATCAGGTTCAGCTATGATGAAATTATATCCGCTACTCACAGTTTCTCCAAAGATAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTTTGGAGGACTGCTGTTGCTATTAAAAGGTTGGATAAGGAGGACAAGGAGTGTGCCAAGGCGTTTTGTAGAGAATTGATGATCGCTAGTTCTCTTCATAACGGAAACGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTGTATAAATATGTATCAGGGGGAAGCTTAGAGCATCACTTGCACGGGAAAAAGAAAGGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGGTATAAAGTTGCCATTGGGATTGCGGAGGCTGTAGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATAAAGCCTTCAAACATTCTGCTTTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCCTCATGGACTTCTGCTCCATCAGTTCCTTTTCTTTGCAAAACTGTGAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTCCAGCATGGGAAAGTATCAGATAAAACTGATGTTTATGCTTTGGGAGTTGTTTTGTTGGAACTCTTAACTGGCCGCAAACCAATTGAATCAAAAAGATCTCCTGGAGAGGAAAACTTGGTAGTATGGGCAAAACCTTTGCTTAGAAATGGGAAAGGAGCCATTAAAGAGTTGCTTGATCCTGAAGTCAAGTACAATTCGAGTTACACAGATGAAATGGCCCGGATGGTTGATGCAGCAGCTGCGTGTGTTACAAGTGAAGAATCTAGGAGGCCTAGCATGGGTGAGATTGTTGCCATACTGAAAGGTGAAGTAGAGCCTGTTTTCTCTAGGAGACGGAAGTCTGGCTATTTTGGTAATGGATATGTGATTGATTACTACCCTCAGTTACAAGCAGCAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCAAGGAGTTCCTGAGTCTGAGGATGATGATTTTCTCTATGGTCGTTGTCGTTGAGAATTATTTTTGCCTTGATTCTCAACATAGTGCAGGAAATAGATGTGAACGATTTCAATACTCGTTAGTAGAAATAGAAGGAACATTGCTTGTTTGTACATTTCTCCCCTTTACCTTCCCCTTACTCAAAGGGGTAAAGTGTAATATATATTTCCTAAGTTTAATTTTCACACACTTTAATAAAATTAGAAACCATCTTATTATATGACTTTTAGAATAAATTCTT 2148 0.4106 MMSLCSSQGNCSGDSKVVSNAHVTSAIGNDSSDYKSNKLITFLKKTMWDFALACAGFVPCGANNDLNGQRKTALEHNKAWLLEESGAELASADPQSVHSSFRFSFCSQVEVESFNMSYSASAAAAATFLMVNLEYESQVKEMKWRRIQPLEKSVSPVVNTLIRFSYDEIISATHSFSKDRVLGRGALSCVFRGRVGLWRTAVAIKRLDKEDKECAKAFCRELMIASSLHNGNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGKKKGVKGSSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIESKRSPGEENLVVWAKPLLRNGKGAIKELLDPEVKYNSSYTDEMARMVDAAAACVTSEESRRPSMGEIVAILKGEVEPVFSRRRKSGYFGNGYVIDYYPQLQAANNEMKSHLALAMQGVPESEDDDFLYGRCR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01442 517 FunFam Putative receptor-like serine/threonine-protein kinase 254 471 - -
Pste8g01442 517 PANTHER OS01G0750732 PROTEIN 88 461 - -
Pste8g01442 517 ProSiteProfiles Protein kinase domain profile. 176 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01442 517 SMART serkin_6 176 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01442 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Pste8g01442 517 SUPERFAMILY Protein kinase-like (PK-like) 155 457 IPR011009 -
Pste8g01442 517 FunFam probable serine/threonine-protein kinase PBL7 137 253 - -
Pste8g01442 517 Gene3D Transferase(Phosphotransferase) domain 1 254 467 - -
Pste8g01442 517 Pfam Protein kinase domain 177 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01442 517 Gene3D Phosphorylase Kinase; domain 1 161 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01442 Pste-Chr8 7923325 7926227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01442 164 459 Trihelix Transcription Factor Family AT1G70460 41.946 1.03e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste8g01442 Pkinase 2.3e-44 CL0016