Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01440 TTAATTAGTACCTATAAATACTATCACTACTTGCAAGAAAATCAGCAAGAAATTAAAATGTTCTGGGAAACACAACTAGTAACAATTTTATTCGTTTTCTTTGCTAAAGCCGTGATTGCTAAGAGTGCAGTTCCAGCTTTATTTGCATTTGGAGACTCAATCTTGGATACAGGAAATAATAACAACCTTTTAGCAATAACTAAGTGTAATTATCCTCCGTATGGAAGGGATTTTCAAGGAGGAATTCCTACAGGAAGATGTTGTAATGGAAAAGTTCCCACAGATTTGATAGCGAGGAGTTTGGGGATTAAAGAAACAGTACCAGCATATCTCAGTAGTAACTTGAGCCCTCACGACCTTGTTACCGGGGTTTGCTTTGCCTCCGCTGGTTCAGGGATTGATGATCTCACAGCTACCTCACAGCAGGGAGTTTTACCAGTACCAGCTCAACTAGGAATGTTTCGAGATTACATAGGAAAAGTGACAGCACTAGTTGGACAACAACAAGCGGCTGACATCATATCCAACAGTGTGTACCTTGTTTCTGTGGGAAACAATGACATTGCCATTACCTATACTCGTTTAGCCACAACATTGCCATTTCCTTTGTATGCGGCTCGTTTAATAGACACCACTTCAAAGTTCTTCAAGAATCTATATGGACTTGGAGCACGAAAAGTGTGGGTATTCAGTACAGTGCCACTAGGATGCTTGCCCGGAGGCAGAACAGTAGCAGGAGGTCCATTAAGGATTTGTGCATTCCTTGAGAATCAACTTGCGCAGATATTCAATGCCCAGTTATCATCAGCAGTTAATTCTATAAGAGCCACCCTTCCCAATTATGACATTAAATTCATTGATGTCTATACTCCTTTGCTTAATATCATAAATAATCCTCAGCCAGCAGGCTTCATTGACGTCTCAGAAGCCTGCTGTGGAACTGGAGCATATGGAATTTCAGGAATATGTACTCTTCTCAGTGTCTGTTCAAATCCTTCCACTTATGTCTTTTGGGATTTTGCCCATCCCACTGAGAGAGCTTATCAATTTGTTGTCTCTTCTATACTGCATTCACACACCAACACCAACACCAACACCAACAATGTTTCAAACTCTTCCGTTAATTCTTCTTCCCTCTTAAGTTAA 1146 0.4049 LISTYKYYHYLQENQQEIKMFWETQLVTILFVFFAKAVIAKSAVPALFAFGDSILDTGNNNNLLAITKCNYPPYGRDFQGGIPTGRCCNGKVPTDLIARSLGIKETVPAYLSSNLSPHDLVTGVCFASAGSGIDDLTATSQQGVLPVPAQLGMFRDYIGKVTALVGQQQAADIISNSVYLVSVGNNDIAITYTRLATTLPFPLYAARLIDTTSKFFKNLYGLGARKVWVFSTVPLGCLPGGRTVAGGPLRICAFLENQLAQIFNAQLSSAVNSIRATLPNYDIKFIDVYTPLLNIINNPQPAGFIDVSEACCGTGAYGISGICTLLSVCSNPSTYVFWDFAHPTERAYQFVVSSILHSHTNTNTNTNNVSNSSVNSSSLLS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01440 381 SUPERFAMILY SGNH hydrolase 49 355 - -
Pste8g01440 381 Pfam GDSL-like Lipase/Acylhydrolase 47 353 IPR001087 GO:0016788
Pste8g01440 381 CDD SGNH_plant_lipase_like 45 356 IPR035669 -
Pste8g01440 381 FunFam GDSL esterase/lipase APG 37 360 - -
Pste8g01440 381 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Pste8g01440 381 Gene3D SGNH hydrolase 33 362 IPR036514 -
Pste8g01440 381 PANTHER GDSL ESTERASE/LIPASE EXL3 31 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01440 Pste-Chr8 7905092 7909725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01440 27 361 Pollen Coat Proteome AT1G75910 40.058 2.41e-76 238