Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01430 CGATCACCAATCCCCAATGTCAACAGAGCAAAACAACCAGTCCAAGTCAATATACCCATCTCCCATCCTTCTCCTTTACAAATATATATCTATATCTACCCTTTCTTCTGCCATTTGTCAGACACACCTTCCTACAATTACAAAGCTACCGGAGTTCACAACACCAATGAGACAACCTTGTTGTGATAAACAGAACATCAATAAAGGTGCTTGGTCCGAGCAAGAAGACCAAAAACTCATTGACTACATCACACTTCATGGTGAAGGCTGTTGGCGTTCCATTCCCAAAGCTGCTGGTCTGCATCGTTGTGGCAAAAGCTGTAGGCTGAGATGGTTAAATTATTTACGACCAGACATCAAACGTGGAGTCTTCGCTGAAGACGAAGAAGACCTCATCATCAAACTCCATGCCCTCCTTGGTAACAAGTTGCCTGGGAGGACAGACAATGAGGTAAAAAACTATTGGAATTCTCACATCCGAAGAAAACTAATAAAGATGGGAATTGATCCAAATAACCATAAGCCACACCAAAGCTTTCTTCGCCCTCATGGTTGTGCAGAGTGTGCATCAACATCCGAGTCCATGAACAAAGACCTCAAAATCCCTTTATCCAAATCCCAGGGTGCTGCCACTGATCATAGGGTTTCCTTCACAAAAGAAGAAACAACCATTATTTCATCACCTCCTTTGAATCTTGACCTCACAATTGCTTTACCTTCGCCTATGATTTGTAGTGAGGAAGACAAGCCTATA 754 0.4271 MSTEQNNQSKSIYPSPILLLYKYISISTLSSAICQTHLPTITKLPEFTTPMRQPCCDKQNINKGAWSEQEDQKLIDYITLHGEGCWRSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGVFAEDEEDLIIKLHALLGNKLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKPHQSFLRPHGCAECASTSESMNKDLKIPLSKSQGAATDHRVSFTKEETTIISSPPLNLDLTIALPSPMICSEEDKPI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01430 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 158 IPR017930 -
Pste8g01430 246 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 52 201 - -
Pste8g01430 246 Pfam Myb-like DNA-binding domain 63 110 IPR001005 -
Pste8g01430 246 Gene3D - 55 115 - -
Pste8g01430 246 Gene3D - 118 176 - -
Pste8g01430 246 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Pste8g01430 246 SMART sant 115 156 IPR001005 -
Pste8g01430 246 SMART sant 62 112 IPR001005 -
Pste8g01430 246 CDD SANT 65 110 IPR001005 -
Pste8g01430 246 SUPERFAMILY Homeodomain-like 60 150 IPR009057 -
Pste8g01430 246 FunFam MYB-related transcription factor 62 115 - -
Pste8g01430 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 114 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01430 Pste-Chr8 7806543 7807838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01430 52 172 MYB Transcription Factor Family AT4G38620 69.531 3.22e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste8g01430 Myb_DNA-binding 6.6e-16 CL0123