Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01423 TACCATTTCTCATCACAACTTCAACTTCAGCTTCAGCTTCAGCTTCCTACTTTATTCCTCACCCTCTCTACCTTCTCTCTTCTTCTTCACTTCTCTCTCTTCATGGGCTGCTGCTTCAGTGCCAGGATCAAAGCTGAGACCCCTCCACGCAATGGTGCAGGTTTGAGTTCAAAGGATGGTAACAAAGAAGAGGATGCCTCGAGCAGCAAAGTCTCCACTCCCTCCGTGCCTCAAACTCCTAGGACGGAGGGTGAGATCTTGAAGTCCTCAAATATGAAGAGCTTCGCCTTCAGTGAGCTAAAAACTGCTACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTTGGTTGTGTTTTTAAGGGGTGGATTGATGAGCAATCACTTGCACCTGTTAGACCAGGGACTGGCATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAGGTCTTCAGGGCCACAGTGAATGGTTGACAGAAATCAATTACCTGGGGCAGCTGCGTCATCCTAATCTTGTGAAACTGATTGGTTACTGCTTAGAGGATGACCAACGGCTTTTGGTGTACGAGTTTTTGACCAAGGGAAGTTTGGATAATCATTTATTTAGGAGAGCTTCGAACTTTCAACCGCTTTCTTGGAATATCCGTATGAAGGTTGCTCTTGATGCTGCCAAAGGTCTTGCATATCTTCATAGTGATGAAGCAAAAGTGATATATCGAGACTTCAAAGCTTCAAATATTTTACTTGATTCAAGTTACAATGCAAAACTTTCTGATTTTGGATTGGCAAAGGATGGACCAGCAGGTGATAAGAGCCATGTCTCTACAAGAGTAATGGGCACATATGGCTATGCTGCTCCTGAATATATGGCCACAGCACATTTCATTTCACAATCACATGTTGCATTTTATTGGATTAGAATTTGGGCTGGCCTGGAGGTTCTATGCCTCAAGGCGCTTAGAGTTTTTGGTCACTTGACAAAGAAGAGTGATGTATACAGCTTTGGGGTTGTTCTGCTTGAAATTATGTCTGGCAAACGTGCACTTGACAGCAATAGGCCAAGTGGGGAGCACAACTTAATTGAATGGGCCAAACCTTACCTCAGCAGCAAACGCAGGATCTTCCAAGTTATGGATGCTCGCATTGAAGGCCAATACACATTGCGTGAAGCAATGAAAGTAGCCAACCTTGCCCTTCAATGTCTGTCTGTGGAACCAAGATTTAGACCAAAAATGGATGAAGTGGTGAGAGCAATAGAGGAAATTCAGGATTCTGATGACAGATCTGGAGGGGTGAGAAGCTCTCGTGATCAAACTGTCAGAAGGAGTGGCCATAGCTCAAGAAGCAGTGGTCCTAGACAGCATAGAAGTAAACAACACGAAACAACAAAGAAGTGA 1401 0.4454 MGCCFSARIKAETPPRNGAGLSSKDGNKEEDASSSKVSTPSVPQTPRTEGEILKSSNMKSFAFSELKTATRNFRPDSVVGEGGFGCVFKGWIDEQSLAPVRPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLRHPNLVKLIGYCLEDDQRLLVYEFLTKGSLDNHLFRRASNFQPLSWNIRMKVALDAAKGLAYLHSDEAKVIYRDFKASNILLDSSYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATAHFISQSHVAFYWIRIWAGLEVLCLKALRVFGHLTKKSDVYSFGVVLLEIMSGKRALDSNRPSGEHNLIEWAKPYLSSKRRIFQVMDARIEGQYTLREAMKVANLALQCLSVEPRFRPKMDEVVRAIEEIQDSDDRSGGVRSSRDQTVRRSGHSSRSSGPRQHRSKQHETTKK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01423 432 Gene3D Transferase(Phosphotransferase) domain 1 159 410 - -
Pste8g01423 432 MobiDBLite consensus disorder prediction 387 410 - -
Pste8g01423 432 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pste8g01423 432 FunFam Serine/threonine-protein kinase BIK1 40 158 - -
Pste8g01423 432 MobiDBLite consensus disorder prediction 1 51 - -
Pste8g01423 432 Pfam Protein tyrosine and serine/threonine kinase 77 276 IPR001245 GO:0004672|GO:0006468
Pste8g01423 432 Pfam Protein tyrosine and serine/threonine kinase 292 385 IPR001245 GO:0004672|GO:0006468
Pste8g01423 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pste8g01423 432 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pste8g01423 432 FunFam Os07g0541700 protein 159 248 - -
Pste8g01423 432 MobiDBLite consensus disorder prediction 33 51 - -
Pste8g01423 432 PANTHER OS01G0588500 PROTEIN-RELATED 37 390 - -
Pste8g01423 432 ProSiteProfiles Protein kinase domain profile. 73 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01423 432 MobiDBLite consensus disorder prediction 387 432 - -
Pste8g01423 432 SUPERFAMILY Protein kinase-like (PK-like) 57 390 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01423 Pste-Chr8 7761059 7764675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01423 1 386 Glycoside Hydrolase AT3G07070 42.569 5.30e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste8g01423 PK_Tyr_Ser-Thr 8.8e-35 CL0016