Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01422 ATATAACACACTTTTTTATGCTCTGTCTACCTCTCACTAAGAAAGGAAATTCAAACTCTAATATGGCAGAAGTGGAACAACCTTCTGATTTGTGTTTAGAACAAGGCGTAACATCCAAAACGGACCAACATACCAAAACCCAAACTGTTTCATTTTTTGGCTTGTTTGCAGCAGCTGATGCAACTGACTGTCTCTTAATGTTCCTAGGAAGTGTTGGTTCCTGTGTCCATGGTGCTTCTCTTCCTGTTTTCTTCATTTTGTTCGGTCGTATGATTGACTCATTGGGACATCTTTCTAATAACCCTCACAAATTGTCCTCACGAATTTCTGAGCATGCTTTGTATTTGGTCTATCTTGGAGGAGTTGTTCTGGTATCAGCTTGGATGGGTGTTGCATTCTGGATGCAAACAGGGGAGAGACAAACGGCACGTTTGCGCTTGAAATATTTGCAGGCAGTGCTAAAGAAGGATATTAATTTCTTTGACAACGAAGCAAGGGATGCTAATATCATTTTCCACATCTCGAGTGACACAATATTGGTTCAAGATGCAATTGGTGACAAGACCGGCCATGCCATCCGTTACCTTTCTCAATTCATTGTTGGATTTGCCATTGGATTTACTTCAGTGTGGCAGCTCACATTACTCACCTTGGCTGTGGTCCCGCTGATTGCTGTAGCTGGGGGAGCTTATACAATAATTATGTCCACTTTATCAGAAAAGGGTGAAGCAGCTTATGCTGAAGCTGGAAAGGTTGCAGAAGAGGTAATTTCTCAAGTGCGTACTGTTTACTCTTTTGTAGGAGAAGAGAAATCAGTTGGTTCATACTCCAAGTCTCTTGAGAATGCTCTGAAATTGGGCAAGAAGGGTGGTTTTGCTAAAGGAGTTGGAGTAGGCTTCACATACGGGCTGTTATTTTGTGCTTGGGCGTTGCTTCTTTGGTATGCCGGCATACTGGTGAGGCATCACAGGACAAATGGAGGCAAAGCGTTCACAACAATTATCAATGTCATCTTTAGTGGATTCGCTCTTGGTCAAGCTGCTCCAAACCTTGGTTCCATGGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAACATGATTGCGTCCGCTTCAAGCAATTCTAAAAAGTTGAATGATGGCACTCTTGTGCCACAAGTAGCAGGGGAAATTGAATTTCGCGAGGTCTGCTTTTCTTACGCCTCAAGATCCAATATGATTTTTGAAAAATTGAGCTTCTCAGTGAGTGCTGGGAAGACTATAGCTGTTGTAGGTCCAAGTGGTTCCGGAAAGAGCACAATTGTTTCTCTAATTCAACGGTTCTATGACCCCACCTCAGGTAAGATCCTGTTGGATGGATATGACCTAAAGAATCTTCAATTGAAATGGTTGAGACAACAGATGGGTTTGGTTAGTCAAGAACCAGCACTATTTGCTACAACAATAGCTGGAAACATTTTATTTGGAAAAGAAGATGGAGACATGGATAAAGTCATACAAGCTGCCATGACTGCAAATGCTCATTCTTTCATTCAAGGATTACCTGATGGTTATCAAACTCAGGTTGGAGAGTGTGGCACCCAACTTTCAGGGGGGCAAAAGCAAAGAATTGCCATAGCAAGAGCAGTGATCAGAAATCCTAAAATATTGCTTTTAGATGAAGCCACAAGTGCTCTAGATACTGAATCAGAACTCATTGTCCAACAGGCATTGGAAAAAATAATGTCAAACAGAACAACCATAGTTGTTGCTCATAGATTATCCACCATACGTGATGTAGATACAATTGTTGTGTTGAGGAATGGTCAGGTAGTTGAAAGTGGGACTCATTTGGAATTGATGTCCAACAATGGCGAGTATGTGAATCTGGTGAGTTTGCAAGCATCACAAAACCTCAAAAACTCTAGATCGATATCTCACTCTGAAAGTTCAAGAAATTCTAGTTTTAGAGAACCTTTAGACAATCTGACCTTAGAGGAGCAGTTGAAGTTAGATACTGCTGGAGAACTGCAATCCAGAGATCAACACTTGCCATCAAACACAACTTCCCCTCCATCAATTTTGGATTTACTGAAACTGAATGCTCCAGAGTGGCCCTATGCAATACTTGGGTCAGTAGGTGCAATATTGGCTGGCATGGAAGCCCCCCTCTTTGCACTTGGAATCACTCACATTTTGACTGCATTTTATTCTCCTCAGGGTTCTAAAATGAAGCAAGAAATTGATCGGATTGCTTTTATATTTCTTGGAGTGGCTGTTATTACAATACCTATTTATCTATTGCTTCACTACTTTTATACATTGATGGGAGAGCGTCTCACTGCCCGTGTGCGTTTATTAATGTTCTCAGCTATTCTCAACAATGAAGTTGCATGGTTTGATATGGATGAGAACAACACTGGCTCGCTAACAGCCATGCTAGCTGCAGATGCAACATTAGTACGAAGTGCTCTAGCTGACAGACTCTCAACCATTGTGCAAAATGTAGCTCTCACTGTAACAGCTTTTGTTATTGCCTTCACATTGAGTTGGAAACTAGCAGCAGTGGTTGTAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACTGAGCAACTATTTCTCAAGGGGTTTGGAGGAGATTATGTCCATGCTTACTCTAAAGCAACTTCTTTGGCTCGTGAAGCTATTGCCAACATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCAATCCAATTTGCATCTGAATTGAACAAACCTAACAAACAAGCACTTCTACGGGGCCACATATCAGGTTTTGGCTATGGCGTAACCCAGCTGTTGGCTTTCTGTTCCTATGCACTTGGCCTTTGGTATGCATCAGTTTTAATTAATAAGAAAGAGTCAAATTTTGGAGACATCATGAAGTCCTTTATGGTCTTAATAATCACTTCTCTGGCAATAGCAGAAACACTGGCTCTTACCCCAGACATTGTAAAGGGATCACAAGCACTGGGATCAGTTTCTGGTATTCTCAAAAGGAAAACAGCCATTACCCCAAATGACCCCAACTCAAAGTTGGTAACTGATATCAAAGGAGAGATAGAGTTTAGAAATGTTTCCTTCAAGTACCCTATGAGACCTGATATCACTATATTTCAGAACTTAAACCTGAGAGTCCCAGTAGGTAAGAGTCTGGCAGTAGTGGGGCAAAGCGGTTCAGGGAAAAGCACAGTGATTGCTTTGGTAATGAGATTTTATGACCCGGATTCAGGGTCAGTCCTGATAGATGAATGTGATATCAAAAGCCTAAACCTGAGATCCTTAAGGCTAAGAATAGGATTGGTTCAGCAAGAACCTGCTTTGTTCTCTACCACAATTTATGAGAACATCAAGTATGGAAAAGAGGAGGCATCAGAAATAGAGGTAATGAAGGCAGCCAAAGCAGCAAATGCTCATGAATTCATCAGCAGAATGCCTGAGGGGTACAATACTGAGGTTGGTGAGAGAGGGGTGCAGTTATCAGGAGGACAAAAACAAAGAGTGGCAATTGCTAGAGCTATTCTGAAAGATCCATCCATTCTTTTGTTGGATGAAGCAACAAGTGCACTAGACACAGTATCAGAGAGGCTAGTCCAAGAGGCTCTAGATAAACTTATGGAAGGTAGAACAACTATTTTGGTAGCTCACCGGCTATCAACTGTTCGTGATGCAGACAACATTGCAGTGCTTCAAAATGGCAGGGTTGCTGAAATGGGGAGCCATGAGAGGCTGATGGCCAAATCCGGAAGCATCTACAAGCAATTTGTTAGTCTACAGCAAGAAGCGTGTGACCAAGAAGACTGTTAATGAATTATTCATTTGCAATTTCTCAAGTAAATGTAGAAATTCAAAGCCTACTTTCAATTTGCAACTTGAATTGAGGCGAAGCCTAGTTTATTTTCAAGAGCATGCCTGAAAGTGTTTTTCTTTTTTTCATACGACAATTTTTTTTTTTTTTTTATATACAAGAGTCC 3982 0.4154 MLCLPLTKKGNSNSNMAEVEQPSDLCLEQGVTSKTDQHTKTQTVSFFGLFAAADATDCLLMFLGSVGSCVHGASLPVFFILFGRMIDSLGHLSNNPHKLSSRISEHALYLVYLGGVVLVSAWMGVAFWMQTGERQTARLRLKYLQAVLKKDINFFDNEARDANIIFHISSDTILVQDAIGDKTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKSVGSYSKSLENALKLGKKGGFAKGVGVGFTYGLLFCAWALLLWYAGILVRHHRTNGGKAFTTIINVIFSGFALGQAAPNLGSMAKGRAAAANIMNMIASASSNSKKLNDGTLVPQVAGEIEFREVCFSYASRSNMIFEKLSFSVSAGKTIAVVGPSGSGKSTIVSLIQRFYDPTSGKILLDGYDLKNLQLKWLRQQMGLVSQEPALFATTIAGNILFGKEDGDMDKVIQAAMTANAHSFIQGLPDGYQTQVGECGTQLSGGQKQRIAIARAVIRNPKILLLDEATSALDTESELIVQQALEKIMSNRTTIVVAHRLSTIRDVDTIVVLRNGQVVESGTHLELMSNNGEYVNLVSLQASQNLKNSRSISHSESSRNSSFREPLDNLTLEEQLKLDTAGELQSRDQHLPSNTTSPPSILDLLKLNAPEWPYAILGSVGAILAGMEAPLFALGITHILTAFYSPQGSKMKQEIDRIAFIFLGVAVITIPIYLLLHYFYTLMGERLTARVRLLMFSAILNNEVAWFDMDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWKLAAVVVACLPLLIGASITEQLFLKGFGGDYVHAYSKATSLAREAIANIRTVAAFGAEDRISIQFASELNKPNKQALLRGHISGFGYGVTQLLAFCSYALGLWYASVLINKKESNFGDIMKSFMVLIITSLAIAETLALTPDIVKGSQALGSVSGILKRKTAITPNDPNSKLVTDIKGEIEFRNVSFKYPMRPDITIFQNLNLRVPVGKSLAVVGQSGSGKSTVIALVMRFYDPDSGSVLIDECDIKSLNLRSLRLRIGLVQQEPALFSTTIYENIKYGKEEASEIEVMKAAKAANAHEFISRMPEGYNTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADNIAVLQNGRVAEMGSHERLMAKSGSIYKQFVSLQQEACDQEDC 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01422 1265 Gene3D - 1008 1257 IPR027417 -
Pste8g01422 1265 PANTHER ABC TRANSPORTER B FAMILY 34 750 IPR039421 -
Pste8g01422 1265 CDD ABC_MTABC3_MDL1_MDL2 1018 1256 - -
Pste8g01422 1265 SUPERFAMILY ABC transporter transmembrane region 684 997 IPR036640 GO:0005524|GO:0016020
Pste8g01422 1265 Gene3D - 377 632 IPR027417 -
Pste8g01422 1265 Pfam ABC transporter transmembrane region 62 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g01422 1265 Pfam ABC transporter transmembrane region 697 969 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g01422 1265 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 350 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g01422 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1007 1256 IPR027417 -
Pste8g01422 1265 CDD ABC_6TM_Pgp_ABCB1_D2_like 685 1001 - -
Pste8g01422 1265 Pfam ABC transporter 403 551 IPR003439 GO:0005524
Pste8g01422 1265 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524|GO:0016887
Pste8g01422 1265 FunFam ABC transporter B family member 4 1008 1263 - -
Pste8g01422 1265 Gene3D ABC transporter type 1, transmembrane domain 34 363 IPR036640 GO:0005524|GO:0016020
Pste8g01422 1265 SUPERFAMILY ABC transporter transmembrane region 57 358 IPR036640 GO:0005524|GO:0016020
Pste8g01422 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 620 IPR003439 GO:0005524
Pste8g01422 1265 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 696 983 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g01422 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1018 1254 IPR003439 GO:0005524
Pste8g01422 1265 FunFam ABC transporter B family member 4 375 629 - -
Pste8g01422 1265 Gene3D ABC transporter type 1, transmembrane domain 869 1262 IPR036640 GO:0005524|GO:0016020
Pste8g01422 1265 CDD ABC_6TM_Pgp_ABCB1_D1_like 61 358 - -
Pste8g01422 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 621 IPR027417 -
Pste8g01422 1265 Pfam ABC transporter 1037 1185 IPR003439 GO:0005524
Pste8g01422 1265 ProSitePatterns ABC transporters family signature. 1157 1171 IPR017871 GO:0005524|GO:0016887
Pste8g01422 1265 CDD ABC_MTABC3_MDL1_MDL2 385 621 - -
Pste8g01422 1265 Gene3D ABC transporter type 1, transmembrane domain 644 863 IPR036640 GO:0005524|GO:0016020
Pste8g01422 1265 SMART AAA_5 1045 1231 IPR003593 GO:0016887
Pste8g01422 1265 SMART AAA_5 411 597 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01422 Pste-Chr8 7755174 7761271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01422 697 1259 Calmodulin-binding Proteins AT2G36910 41.021 3.01e-130 430