Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01416 GTGGTTTTCTTTTTTCAAATTTCACTCGTTTTCTTTGTGACGGACTGTGATATGAGATTATAGGAAGGTTTCTAGAAGCCCAAAAAAAAAAAGGATGAGGAACCATATAAAGAACGTTTGCGAGTTTTGTCCTCAGAAAATGCGTCGAGCCACGATTGAAGATTTTTCATTTTGTGTTTATCTATTTTTTCTTAATAAATTTTTATGAGACCTAACAAAGAATTTACGTGAACGTGGGGGAAGGGGAATAGAATAAATCTATTAAGATTTCAAAGGTTTACTCACTCGTCCTCGTTTGTGTCCCAGACTGCTCATTTTGACTATTTAAGGTGGTTTCTTTCTTAAATGTAAAGCAGGGAATTAATGTTCCATTTCATTTACTTTGTCAACTGACTCTTAGAGAGAGAGAAAAAAGAAGAGAGAGAAATGGCAATTGGGTTCATGGAGGTGCAGCTGGTGAAAGCAAAGGGTCTTCACGAAACTGATATCTTTGCTCACATGGATCCGTATGTCCTATTACAATACAAAGGTCAAGAGCGCAAGAGCAGTGTAATTCATGAGGGGGGCAGCAATCCTGTATGGAATGAGAAATTTGTATTCAGAGTGGAATACCCCGGATCAGGAGATCAATACAAGCTCAACCTTATAATCATGGACAAGGATGTATTTTCTGCAGATGACTTTGTTGGCCAGGCTACAATCTATGTAAAAGATTTATTGGCTGAAGGAGCAGAGAATGGATCTGCTGAGATTCGTCAACACAAGTATAGTGTGGTTCGAGCTGACCAATCTTATTGTGGTGAAATTGAAGTTGCTATAACTTTCACCCGAAAGGAAGACGAATATGCTGACGATGATATTGGAGGATGGAGGCAAAGTAAGATGGACCCCTATGTTGTGATACAATACGAAGACCAAGAGAAGAAGAGTAGTGTTGCTAATGGTACGTTTTCTTGTATTCAACTAAAGTCTACATCCATAGATTTATCTCAACTGGATCAAGGAATCAACACAAGCTCATCCTCAAAATTATGGATAAAGACGACTAATTTGTTGGACAGGCCGTGTAAGACTTCAAATCCATGTAGGAGATTTATTGGGCAAGGGGGTGGCGAAATGAAGGAGCTAAGCTGCAAACTCTTAAAGTACAGAGTGAATCTTCACTCTTCAAAGGAAAGAGACAACATGGCAATTGGTTTCATGGAGGTGTTGCTTGTGAAAGCAAAAGGCCTGCATAACGCTGATATTTTTGGTGAAATGGACCCGTATGTTCTGATACAATACAAAGGTCAAGAGCATAGCAGTAGCGTCGCTACTGGGCAGGGTACAGATCCAGTATGGAATGAAAAATTTATCTTCAAAGTAGAATACCCTGAATCAGGTGATCCACACAAGGTCATCATCAAAATTATGGACCAAGACCTATATAAGGATGAGTTTGTTGGACAAGCCACAGTCCATGTCAAGGATTTATTGCTCCAAGGTATAGAGGATGGAGGAGCTAAGCTACAAACTCTCAAGTATAGAGTGGTTCGTACAAACAATTCTTACTGTGGCGAAATTGACGTTGGCATTACTTTTTTCACCCCATGCACAGGTGGAAGAAAAAATTTAAAAGAAGACATGGGAGAAAGGAAAGAAAGTGACCACTATCCCCCACAGATTAGCAAGGCCAAGATATAAAAGACAAAATGCATGCCAGCAGTAGTTTTCGTTAATTTGGATTGTCATTCAC 1735 0.3942 MAIGFMEVQLVKAKGLHETDIFAHMDPYVLLQYKGQERKSSVIHEGGSNPVWNEKFVFRVEYPGSGDQYKLNLIIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAEIRQHKYSVVRADQSYCGEIEVAITFTRKEDEYADDDIGGWRQSKMDPYVVIQYEDQEKKSSVANGTFSCIQLKSTSIDLSQLDQGINTSSSSKLWIKTTNLLDRPCKTSNPCRRFIGQGGGEMKELSCKLLKYRVNLHSSKERDNMAIGFMEVLLVKAKGLHNADIFGEMDPYVLIQYKGQEHSSSVATGQGTDPVWNEKFIFKVEYPESGDPHKVIIKIMDQDLYKDEFVGQATVHVKDLLLQGIEDGGAKLQTLKYRVVRTNNSYCGEIDVGITFFTPCTGGRKNLKEDMGERKESDHYPPQISKAKI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01416 418 ProSiteProfiles C2 domain profile. 239 359 IPR000008 -
Pste8g01416 418 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Pste8g01416 418 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Pste8g01416 418 MobiDBLite consensus disorder prediction 397 418 - -
Pste8g01416 418 Pfam C2 domain 260 353 IPR000008 -
Pste8g01416 418 Pfam C2 domain 145 175 IPR000008 -
Pste8g01416 418 Pfam C2 domain 6 105 IPR000008 -
Pste8g01416 418 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
Pste8g01416 418 SMART C2_3c 258 358 IPR000008 -
Pste8g01416 418 SMART C2_3c 5 106 IPR000008 -
Pste8g01416 418 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 252 386 IPR035892 -
Pste8g01416 418 Gene3D C2 domain 2 135 IPR035892 -
Pste8g01416 418 Gene3D C2 domain 255 388 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01416 Pste-Chr8 7727179 7741954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01416 3 109 C2H2 Transcription Factor Family AT4G21160 31.776 1.64e-10 60.1