Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01401 TGGGTTTTCAACAAAATTGGTTGAACGCAAGAGGACGAGACAGCGAAACTGAAAGAAAACAGTTAAAGCAGTGCTAGTGTTCAACCAACTATCCATGCTCCTCCTCCACGCCAACTCGGTTCGGTTTAACCAACCGGTTCGGCGCTTTTCACCTCCTCGAACCAATTCCGTTCACTAGTCCCGCCCGCGCTCGCGCACCGAAGAACCAAAATTCAGTTCAGAAGCCAGCTGCACCGCGAAGCTCACAAATCACGATCATGCCTTTCATTTCCAAAATTCAGCGTCAATCTGATTTCAACCTCTTCAATTCCAACACTCCTATTGTCATAGACAATGGTGCCTCGTATTTTCGCATTGGGTGGGCGGGAGAGTCTGAACCTCGCGTTATTTTCCGCAACATTGTGCAAAGGCCGCGCCATAAAGTAACCGGGGAAAATGTCACTATTGTGGGTGACCATGATCCGACTTTAATGAAATACTTTGATTGCACTCGCTCAGGGCCACGATCTGCATTCGACAGCAATGTTGTGTACCAGTTTGAAACAATGGAATATATTCTTGATTTTGGTTTTGACCGGATGGGTGCAAATGGAACAGAGATTGATTGTCCTCTCCTGATTACAGAATGCATATCCAACCCAGTTCAATCTCGTAGTAGAATGGCAGAACTTCTTTTTGAGACTTATGGAATTCCATCAATTGCCTTTGGTGTGGATGTGGCATTCAGCTATAAATTTAATCAACAACAAGGAGTTTGTGCTAAAGATGATCATTTGAAGCAACTCCTTTCACTTAAATATCCTTATCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACTTGAAGATGGAACATTGTTATATTGCAACAGATTATTTTTCTGAAACTCGGTTGTTTAAGCTCCCTTGGGTTCCATCCCCAATAGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGGCTTCGGGAAATGGCTGAAGCAAAGAGGTCTTCTAAAATAAATGAACTGGAAAATGAATTGCATGGTTTGGAGTTTCTCTTGTATCAGCTTGATCAAGTAGAAGAGGGTGAGGTTCCATCTTTCCTGGCAGAAACTGGCTATGTCTCTAGGCAGGAGATAGAATCTGCAAGTAATAAAGTTATGCAATCTTTAAGGAAAGCAAAAGGTGAACCAAAGAATGAACAAGCTGAAACTGAAAAGCCTGATCTTGCTGCTGATGAGAAGTATTCTCTTATAAACATTCCTGATGACATGTTGACCCAAGAACAGCTCAATGAAAAGAAGAAACAGCTGTCACTCAAATCTATGGCAGAAGGGAGGCAGCGATTGAAACAGAAGCGCTATGAAGAGGAATTGGAACGAGAGAGAAAACAACAGCTAGAGGAGGAGAAACGCCTAGAGAACCCGAAGCTTTACCTGGAGCAATTACATGCTAAATACAAAGACCTTTCAGAAAAGGTTGACCAGCAAAAACGACTAAAGACAAATGCAGATTATTCAAATAGAAATAATCTGTCTGGCGGTGTTGGCCGAGGTGAAAGATTGAATGCTGCTCAGAGAGAACGAATGCGTCTCTTGACTACTGCAGCTTTTGATCGAGGTAAGGGCGAGGATACATTTGGTGCCAAAGATGAAGATTGGGAACTATACAAATTGATGAGTAAAGATAATAATGATGATGATGAGGGACCTGATGAGGATGAGGCAGAGCTGGCCCGTATCTCTTCTAGGCTCCAGAAGTTGGATCCAACATTTATACCAAAGTTAGAAGTCGATACCTCTGAACCTACTGAGGTGCCACGTGTTCAACCTCTGACCAAAGAAGATTTTCAGATTGTTCTTGGGGTCGAAAGATTCAGATGTCCTGAAGTATTGTTTAATCCAAACTGGATTGGGGTTGATCAGGTAGGATTAGATGAGATGGTAGGGGTGTCAATAAGGAGGTTACGGAACAAGGATGAGCGCTTGGAAGAGAGACTGACTAATTCCATACTTGTGACTGGGGGAAGTTCTCTTTTCCCTGGTATAATTGAACGCCTGGAAGCTGGAATTCGAATGATTAGACCATGTGGCGCCCCTATAAAAATAGTTAGAGCACTGGATCCAGTCATTGATGCTTGGCGTGGGGCTGCTTCCTTTGCCTCAACCTCACAGTTCCATAGCCAAACTTTCAGTAGACTGGATTATTATGAAATGGGTGGCGACTGGCTTCGCAATTATCAACTGAAATATGCATTGTAATTGATCCCAGTATAGTGTGTACATTGTCTGGAATTTTCTACCGAGTTTAGAAAGAATTCACCTGTAGTATAATCCGTTCCTTGTCTTGCATTTGCTGACGCTAGAACCGCGAACATCAGCATAACTGCAAAAGTAGGGTGCTACAATGCTACTGTAATATTTTCAATCTTGTGAATAGCATATACTTAGTTCATATTAACTTATTTAATTATCCGTTTAGTTTCC 2498 0.4235 MPFISKIQRQSDFNLFNSNTPIVIDNGASYFRIGWAGESEPRVIFRNIVQRPRHKVTGENVTIVGDHDPTLMKYFDCTRSGPRSAFDSNVVYQFETMEYILDFGFDRMGANGTEIDCPLLITECISNPVQSRSRMAELLFETYGIPSIAFGVDVAFSYKFNQQQGVCAKDDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIATDYFSETRLFKLPWVPSPIEEPPSEEEIARKAAIKEKQGQRLREMAEAKRSSKINELENELHGLEFLLYQLDQVEEGEVPSFLAETGYVSRQEIESASNKVMQSLRKAKGEPKNEQAETEKPDLAADEKYSLINIPDDMLTQEQLNEKKKQLSLKSMAEGRQRLKQKRYEEELERERKQQLEEEKRLENPKLYLEQLHAKYKDLSEKVDQQKRLKTNADYSNRNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWELYKLMSKDNNDDDEGPDEDEAELARISSRLQKLDPTFIPKLEVDTSEPTEVPRVQPLTKEDFQIVLGVERFRCPEVLFNPNWIGVDQVGLDEMVGVSIRRLRNKDERLEERLTNSILVTGGSSLFPGIIERLEAGIRMIRPCGAPIKIVRALDPVIDAWRGAASFASTSQFHSQTFSRLDYYEMGGDWLRNYQLKYAL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01401 671 MobiDBLite consensus disorder prediction 307 326 - -
Pste8g01401 671 Gene3D - 631 658 - -
Pste8g01401 671 Pfam Actin 19 155 IPR004000 -
Pste8g01401 671 Pfam Actin 536 663 IPR004000 -
Pste8g01401 671 FunFam Actin-related protein 5 531 560 - -
Pste8g01401 671 Coils Coil 398 418 - -
Pste8g01401 671 SMART actin_3 19 668 IPR004000 -
Pste8g01401 671 Coils Coil 368 394 - -
Pste8g01401 671 Gene3D - 561 630 - -
Pste8g01401 671 FunFam ARP5 actin-related protein 5 homolog 561 630 - -
Pste8g01401 671 SUPERFAMILY Actin-like ATPase domain 169 664 IPR043129 -
Pste8g01401 671 FunFam Putative actin-related protein 5 631 658 - -
Pste8g01401 671 Gene3D - 17 175 - -
Pste8g01401 671 PANTHER ACTIN 171 658 IPR004000 -
Pste8g01401 671 Gene3D Actin; Chain A, domain 4 474 560 - -
Pste8g01401 671 SUPERFAMILY Actin-like ATPase domain 18 158 IPR043129 -
Pste8g01401 671 MobiDBLite consensus disorder prediction 310 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01401 Pste-Chr8 7645920 7653269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01401 537 658 Cytoskeleton Gene Families AT5G09810 36.885 6.42e-18 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01401 8 7645920 7653269 Pste8g01401 8 7645920 7653269 ECH
Pste7g02058 7 18886818 18893341 Pste8g01401 8 7645920 7653269 PCT