Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01376 ATGATCGAAAAGGCCTCTTTCCTTCTTATCATGGACACAAGCCACCACCTCCCTCCCGTTTCCGGCGCCACCGTCCCTGGTGGAAACAAACAATCACAGCAAAAGGAATTGGCGCTCTCAGGTGATTGCTATAAAGGTTCGAACCTTAAGCTCTCCTTAGACAAAATTTTTCCAAGTCTTACTACAGATATCATTGACACAAAAGCAGTAGAAAAACTTGGGACAATGACAGGATTTCGCTCATCATGTGGAGCATGCAAGTTCCTCAGGAGAAAATGCATGAGTGATTGTGTATTTGCTCCTTACTTCTCCTACGACCAAGCTGCAACACATTTTGCAGCAGTGCATAAGATTTATGGTGCTAGTAATGTCTCCAGGCTATTGTCACATCTTCCAATCCAGAATAGAAGTGATGCTGCCATCACCATATCTTATGAAGCCTTGGCTCGCATGCAGGATCCTATATACGGCTGTGTTTCTCACATCTATACATTGCAGCAACAGGTTGCCAGCTTGCAAGAGGAGATAGATGCTCTAGGAAGTCTAATGGCAAATTCCACGGTTAGTGTTGTCAATTGCGGCAGAGTCCAAGCACCAATGAACTCAAACAATGGAGCACAATATAATATTTTACAGCATGATGCTGCAAGGACACAATATTGTCAAAATAATCTGGCCAATTTTCTTTCACAAGAAGGAAGTGCCACTGGCTACCAAAGTTTGGACTCACAGATGGATATAGAGCTTCCTAATGCACACGTGGAAGAACCTTCATTTGGGGATTCCAATTCCAATCCGTTAGAACAGTTCCTATCTGGAATTGACCAAGAGGTCTTCGTGAATCATCCATGGTTCAAGCATAATGCAGACATAAATAACTAG 882 0.4308 MIEKASFLLIMDTSHHLPPVSGATVPGGNKQSQQKELALSGDCYKGSNLKLSLDKIFPSLTTDIIDTKAVEKLGTMTGFRSSCGACKFLRRKCMSDCVFAPYFSYDQAATHFAAVHKIYGASNVSRLLSHLPIQNRSDAAITISYEALARMQDPIYGCVSHIYTLQQQVASLQEEIDALGSLMANSTVSVVNCGRVQAPMNSNNGAQYNILQHDAARTQYCQNNLANFLSQEGSATGYQSLDSQMDIELPNAHVEEPSFGDSNSNPLEQFLSGIDQEVFVNHPWFKHNADINN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01376 293 Pfam Lateral organ boundaries (LOB) domain 82 178 IPR004883 -
Pste8g01376 293 PANTHER LOB DOMAIN CONTAINING PROTEIN 76 230 - -
Pste8g01376 293 ProSiteProfiles LOB domain profile. 81 183 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01376 Pste-Chr8 7447737 7451254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01376 76 189 AS2 family AT5G06080 68.421 1.10e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste8g01376 LOB 5.8e-35 No_clan