Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01374 ATGGCCAATCGCTGGTGGGCCGGGAATGTTGCCGTCAGGCCCAACGAAACCAACTCCTCCCATCAGCAAGACAACAACAGTGGCGACAACAACACTAACGCCACCTCCACCAACAGTGGCAACAGTAACACCAATGTTAACGCCGTTGAGGATGACGCCAACAACGACCGTGAAGCCGAGGACCAGAACCTTAGCAGCGGTCGGAGGCCACGTGGCAGGCCACCGGGCTCCAAGAACAAGCCCAAGCCAGCCGTAGTCATAACCAAGGAGAGCCCCAACGCCCTCCGCAGCCACATCCTCGAAATCAGTGGTGGCAGTGACGTGACCGACTGCATTGCCACCTTTGCCACGCGCCGTCACCGCGGCGTGTCCGTTCTCAGCGGCAGTGGAGTCGTCACCAACGTCACGCTCCGGCAGCCAGCCGCGCCCGGCAGCGTCATCACGCTTCAGGGTCGGTTCGAGATTCTCTCCCTCTCGGGGGCTTTTCTTCCGGCACCATCGCCGCCAGAGGCCACCGGACTGACCGTGTACCTGGCAGGCGGACAGGGGCAGGTGGTGGGAGGCAGCGTGGTGGGGCCCCTCATCGCCTCGGGACCCGTGATGGTGGTTGCTGCTACTTTTGCCAACGCTACTTATGAAAGGTTACCCCTTGAGGATGAACAAGGTGAGGAGGACATGCAAGAGGTGAATGAAGGTGGAACGCCACCGCCTTCTCAGGGTGAACAGGTTTCAATGCCTGTCTATAATTTGGTGCCTAATAATGGTGATGTGTTTTGGGGTCCTCCCCCTCGCCCTCCACCTCCACCTTCTAATTATTGA 819 0.5946 MANRWWAGNVAVRPNETNSSHQQDNNSGDNNTNATSTNSGNSNTNVNAVEDDANNDREAEDQNLSSGRRPRGRPPGSKNKPKPAVVITKESPNALRSHILEISGGSDVTDCIATFATRRHRGVSVLSGSGVVTNVTLRQPAAPGSVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLIASGPVMVVAATFANATYERLPLEDEQGEEDMQEVNEGGTPPPSQGEQVSMPVYNLVPNNGDVFWGPPPRPPPPPSNY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01374 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 245 IPR014476 GO:0003680
Pste8g01374 272 MobiDBLite consensus disorder prediction 12 50 - -
Pste8g01374 272 MobiDBLite consensus disorder prediction 1 91 - -
Pste8g01374 272 MobiDBLite consensus disorder prediction 258 272 - -
Pste8g01374 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 220 - -
Pste8g01374 272 Gene3D - 95 228 - -
Pste8g01374 272 MobiDBLite consensus disorder prediction 218 272 - -
Pste8g01374 272 CDD DUF296 96 179 IPR005175 -
Pste8g01374 272 ProSiteProfiles PPC domain profile profile. 92 230 IPR005175 -
Pste8g01374 272 PIRSF ESCAROLA 8 262 IPR014476 GO:0003680
Pste8g01374 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 208 IPR005175 -
Pste8g01374 272 FunFam AT-hook motif nuclear-localized protein 95 223 - -
Pste8g01374 272 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01374 Pste-Chr8 7432710 7433528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01374 1 253 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.198 6.85e-75 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02082 7 19116618 19117490 Pste8g01374 8 7432710 7433528 PCT