Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01372 ATGTCAGGAAAATGCAGGGAAATCGGGCACATTGTACGTCTCCGGCAGATGCTGCGACGGTGGCGGAACAAGGCGAGGATGTCGGCGAACAGGACACCGTCGGATGTGCCGGCGGGACACGTGGCGGTGTGCGTGGGGAGCAGATACACGAGATTCATCGTGCGGGCAACGTACCTGAACCACCCGGTGTTCAAGAAGCTTCTACTGGAAGCGGAGGAAGAGTACGGTTTCACGAACCAGGGACCGTTGGCCATCCCCTGCGACGAATCCCTCTTCGAAGATGTCCTCCGCTTCATCGAAGTTGACGATTTTCAGCGACACTGCCACGTCGGCATCTCCAACAACCTCGACTTCTGGTCCGACTCCAGACCGCTCCTACCGGGCCCCACCACCATCCATACAAACATTTGGTAA 414 0.5773 MSGKCREIGHIVRLRQMLRRWRNKARMSANRTPSDVPAGHVAVCVGSRYTRFIVRATYLNHPVFKKLLLEAEEEYGFTNQGPLAIPCDESLFEDVLRFIEVDDFQRHCHVGISNNLDFWSDSRPLLPGPTTIHTNIW 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01372 137 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
Pste8g01372 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01372 Pste-Chr8 7387397 7387810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01372 3 128 Calmodulin-binding Proteins AT4G34750 51.034 8.21e-45 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01372 8 7387397 7387810 Pste2g00705 2 7351917 7352336 PCT