Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste8g01370 | ATGATCATGGAGGGATCTCACTCTCAGTACTGGATGTATGTGAAGAGAGAACAAATCCTGAAGTCACACTCACACCTTGAAGCACCAATTGGAGATGCTGAAAACAACAACAGCAACAGTTACTCGTGGGAAGAAAGGGCTTTTGCAGAAGACACAGCTAGGATACTTGGTGGGAGCATGTGGCCTCCAAAATCCTACTCTTGCACCTTTTGTAAAAGAGAGTTCAGGTCTGCTCAAGCTCTTGGAGGTCACATGAATATCCACAGGAGGGACAGGGCCAGGCTCAAACAATATCACAATTATGAACCCCTTCATCATCATCACAAAAATGATTTCATCAAATCCTTTTTAGGTAATCATCATTTTTCTGCACCTGATATTTCCACCCAGATAGAGTGTGGTCTTAGTGCTTCTTATTCTAGCCCTGCAACTAAAATTACAACAACCAAATTCTCATCTATATCCACACAAGAAAATTGTGGTCAGCATAAATTTTCACCTTATTCTTCTTCTTCTTCAATTATCTTGGGACAAATGGGGTCTCCTAATTCAGAACAAGAAGGGGTAGTCAAAGCAAGGGAGTACAATTTTAATGGAATGGGTTGTTGTAATTATGTTGAAACAAATTTGTCTGTGGGACTGACATCCACGTCGGGCCAAAAATCATCTCCAACAGTTCCTTGTGGGGACAGAGCCAAGATAGGTCCTAAGAGATTAAAGACTAGCATTTCTTCTCTGCCTCTCTTCCTCAAGCCATGTTCAAATGATCAAAGTTTGGCTTTTCAACCTACGGAAATCCCACTTGGACTTAATCATGGAATGGAAGACTTGGATCTTGAACTCAGGCTAGGGAAACAACACAAAGTTAAGTAG | 873 | 0.4124 | MIMEGSHSQYWMYVKREQILKSHSHLEAPIGDAENNNSNSYSWEERAFAEDTARILGGSMWPPKSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQYHNYEPLHHHHKNDFIKSFLGNHHFSAPDISTQIECGLSASYSSPATKITTTKFSSISTQENCGQHKFSPYSSSSSIILGQMGSPNSEQEGVVKAREYNFNGMGCCNYVETNLSVGLTSTSGQKSSPTVPCGDRAKIGPKRLKTSISSLPLFLKPCSNDQSLAFQPTEIPLGLNHGMEDLDLELRLGKQHKVK | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste8g01370 | 290 | SMART | c2h2final6 | 66 | 88 | IPR013087 | - | |
Pste8g01370 | 290 | Gene3D | Classic Zinc Finger | 60 | 116 | - | - | |
Pste8g01370 | 290 | SUPERFAMILY | beta-beta-alpha zinc fingers | 63 | 93 | IPR036236 | - | |
Pste8g01370 | 290 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 68 | 88 | IPR013087 | - | |
Pste8g01370 | 290 | Pfam | C2H2-type zinc finger | 66 | 89 | - | - | |
Pste8g01370 | 290 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 66 | 93 | IPR013087 | - | |
Pste8g01370 | 290 | PANTHER | OS07G0101800 PROTEIN | 37 | 286 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste8g01370 | Pste-Chr8 | 7376652 | 7377524 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste8g01370 | 42 | 97 | C2H2 Transcription Factor Family | AT2G37740 | 76.786 | 1.48e-25 | 101 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pste8g01370 | zf-C2H2_6 | 1.8e-06 | CL0361 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste8g01370 | 8 | 7376652 | 7377524 | Pste8g01370 | 8 | 7376652 | 7377524 | ECH | |
Pste7g02086 | 7 | 19153378 | 19154239 | Pste8g01370 | 8 | 7376652 | 7377524 | PCT |