Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01369 ACTTCTTTCAAATTTTCTTCCTTTTCGCTTCTCAATTCCGTTGCGTAAGTATTTAGTAATTCCAATGGCTGGAATTTGCTGTGGCCTTGTTGGAGAAGCCGGAGAGACTCTCACTTCGATCGAGCCTCCCTCATGCCCCTCCGCTCGCCGGAGTATGGACCTATTACCCTTCAAATACATAGCAGCTGAAATGGCAAGCCCGGTGCCGGAGACCAGCCGGAAGCGCCAGAAGCTGGATCACAGCGCTTCTCCGCCCAGGGACTGTGAAAACGCTGTTCAGAGTTCCGAATCAGAGGGAGTTGAGCCTGTCTCGCTTCCCAACATTCCTATATTGGACTCACGGACGACGGTTGTCATTGATGAGAGTCCGAGGTATGGGGTAACCTCGGTTTGTGGCAGGAGAAGGGACATGGAAGACGCCGTTTCGGTTCGTCCATCGTTTTGCCTACAAAATTCTTCTCAAGACGGCTTTCATTTCTTCGCTGTTTTTGACGGTCACGGATGCTCACATGTGGCGACTATGTGCAGAGAGAGGTTACACGAGATAGTGAAGGAGGAAGTTCACAAAGCCAAAGAGAATTTGGAATGGGAATCAACCATGAAAAAGTGTTTCGCTCGCATGGACGAAGAAGTTCTAAGGTGGAATCGAAACAACGAGATTCCTACCTGCAGGTGCGAGCTTGAGACTCCACACTGCGACGCCGTTGGCTCCACCGCGGTCGTCGCCGTCGTAACACCGAAAAAAATCATTGTCGCGAACTGCGGCGACTCACGCGCCGTGCTTTCCCGAAACAACGTAGCCGTTCCTCTCTCGGACGATCACAAGCCGGACCGACCCGACGAGTTGCTTCGGATCGAAGTCGCTGGAGGGCGAGTGATATATTGGGATGGGCCCAGAGTGCTTGGGGTGTTGGCCATGTCCAGAGCAATTGGGGACAACTATCTCAAACCGTATGTAATTTCGGAACCGGATGTAACGATAACGGAGAGGAGTGCCGAGGATGAGTGTTTGATACTAGGGAGCGATGGCCTTTGGGACGCCGTGCAAAACGAAACCGCGTGCAAGGTTGTGCGGATGTGCCTCCACGCGCAGAATCCCTCCTCTCCGGTGAGGGACATGGCCGTGGACTGCTCCGACAAGGCATGCTCCGATGCCTCCATTCTGCTGACTAAGCTGGCCTTGGTTAGGCACAGTTCCGACAACGTGAGTGTGGTGGTCGTTGATCTGAGGAAAGATCAACCTCAACAACAAAAGGATTGATTAATTGAATGACTCGAAAGAAAATGTAGACACCTTAATTTTTTAACAAAAAGGGGAAAAATCAAGGATGTTTCTTTATTGTAATTAATCAAACAAAGGGAGGGTGTGTAACACTTGAAAAAATTGTAAACAAATCAAGGGAAATTTTTAGAGTTTACACACTCTGCTTTGCTTGTAACTAGATATATAAATGAAATTGAAATAGGCTTGGATCTATAAATATAATTGTGTCCACCAATTTTGTTGGTTGCTTCAATTAATCAGGGGATAAACTATACCTTTGTACCGTGGGGATTTCAAGGGATGAAGAAAAAATATACAACAAAATATTTGGTTCTTTACCTGAATGTAAAAAAAAAAACTAACATCCTTACAAATGTTAAAGGATTAGAGTTGTGAAATAAGTCTTTGAGTGCA 1678 0.4702 MAGICCGLVGEAGETLTSIEPPSCPSARRSMDLLPFKYIAAEMASPVPETSRKRQKLDHSASPPRDCENAVQSSESEGVEPVSLPNIPILDSRTTVVIDESPRYGVTSVCGRRRDMEDAVSVRPSFCLQNSSQDGFHFFAVFDGHGCSHVATMCRERLHEIVKEEVHKAKENLEWESTMKKCFARMDEEVLRWNRNNEIPTCRCELETPHCDAVGSTAVVAVVTPKKIIVANCGDSRAVLSRNNVAVPLSDDHKPDRPDELLRIEVAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPDVTITERSAEDECLILGSDGLWDAVQNETACKVVRMCLHAQNPSSPVRDMAVDCSDKACSDASILLTKLALVRHSSDNVSVVVVDLRKDQPQQQKD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01369 398 Pfam Protein phosphatase 2C 103 360 IPR001932 -
Pste8g01369 398 PANTHER PROTEIN PHOSPHATASE 68 388 IPR015655 GO:0004722|GO:0006470
Pste8g01369 398 MobiDBLite consensus disorder prediction 49 63 - -
Pste8g01369 398 CDD PP2Cc 103 363 IPR001932 -
Pste8g01369 398 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
Pste8g01369 398 MobiDBLite consensus disorder prediction 45 85 - -
Pste8g01369 398 MobiDBLite consensus disorder prediction 66 80 - -
Pste8g01369 398 SMART PP2C_4 93 386 IPR001932 -
Pste8g01369 398 ProSiteProfiles PPM-type phosphatase domain profile. 103 388 IPR001932 -
Pste8g01369 398 SUPERFAMILY PP2C-like 87 389 IPR036457 -
Pste8g01369 398 SMART PP2C_SIG_2 115 388 IPR001932 -
Pste8g01369 398 FunFam Protein phosphatase 2C 37 98 395 - -
Pste8g01369 398 Gene3D - 90 398 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01369 Pste-Chr8 7343907 7345934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01369 83 395 PP2C-type Phosphatase Gene Family AT1G07430 58.309 2.23e-136 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02100 7 19302021 19303921 Pste8g01369 8 7343907 7345934 ECH
Pste8g01369 8 7343907 7345934 Pste8g01369 8 7343907 7345934 ECH
Pste7g02100 7 19302021 19303921 Pste8g01369 8 7343907 7345934 PCT