Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01339 GACAAACACACCGAGACAAACAGTGAGAAAAAGAGAGAAGCATACCAAGAAAAGCTCTTGGCTGGTTCGCCCCTTGTGCTTATTTGGTTGTTGTTCAGAATCCCTAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGTTTTGATCGGATGCGATGAGCACACAGGGGCAAGTGATTGATGAGGCGGTTCTTGATGACATAATCCGCCGCTTAACGGAGGTCCGATTGGCCCGACCCGGCAAGCAGGTTCAGCTCTCTGAGTCTGAGATCAAGCAACTCTGCGTCGCTTCTAGAGACATCTTCATTAACCAGCCCAATTTGCTTGAACTCGAGGCCCCCATCAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGCTTGCCTCCTACTGCAAATTATCTCTTTTTGGGGGACTATGTGGACCGTGGGAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTGCGTATAAAATCAAATATCCAGAAAACTTTTTCCTGTTGAGGGGGAATCATGAGTGTGCTTCCATTAATAGGATTTATGGGTTTTATGATGAATGTAAGCGAAGGTTTAATGTGAGGCTTTGGAAAGCCTTTACTGACTGTTTTAACTGCCTTCCTGTGGCTGCCCTTATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGAACTCACAAACTTGGATGAAATCAGGAATCTACCTCGTCCTACTGCAATTCCCGACACCGGCTTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGGGATGTGAAGGGTTGGGGTATGAATGACCGAGGAGTGTCCTACACCTTTGGCCCTGATAAGGTGGCTGAATTTTTGACAAAGCATGACTTGGACCTCATTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAGTTCTTCGCTGATAGGCAACTTGTTACAATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGATGAAAATTTGATGTGCTCTTTTCAGATTCTTAAGCCTGCAGAGAAAAAATCAAAGTTTGTGATGTCAAACAAGATGTGATGGCTGGCACATCATTGTCACGTAATTAATTAAGATATGTATTCATGGGGTTAAATTAAATCCTGAAGATTTAGAGTGCATGGTCTTAAGTTCTATCTATTCTGAGGTGGTGATGATCAGATGATGATGAGCAACTGTACTGTTAGAACATCCAGTCAGGCAAGTGAACATGAGGTACTATAAGGGATATTAAGTGCTGCTGGATGGCCATAAAAGCAAAGGCTTTTATTTTATTTTTTTTTCCTTTTCTTGTTTCATAATTATTCTACGACACAATATGTACATATATGTGTTGTAGATGCTGTGGAAATGACCTTTGCCCTGAAAGCTTCTCTTAGACTGTCAATTTACACTGATAGAGCAGTTTGTGTTGATGATTCTGGCCAATTTTATTCAGTTAGTAAAGGTGCAATTGTTGGATTTTATGGTTTCATATTGGTTTGTTTTTGCACTGTTTGCTCTATATCTCATACCAGTAGGTAGAAATATTGATGATCACACCTTATTGGGGAGCAAATGTTGCTTTGCTTGCTTTGATTCAAAGGAATCTTCCCTGATCTTCCGAGATAGCGGTCCTTTTCCTTGCCTAGCCAAAGATACACATTAGATTCTCTTAATTTGCCA 1722 0.4158 MSTQGQVIDEAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASRDIFINQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDDKILCMHGGLSPELTNLDEIRNLPRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKSKFVMSNKM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01339 315 CDD MPP_PP1_PPKL 12 302 - -
Pste8g01339 315 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 16 307 - -
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 91 118 IPR006186 GO:0016787
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 187 214 IPR006186 GO:0016787
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 62 89 IPR006186 GO:0016787
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 158 184 IPR006186 GO:0016787
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 244 264 IPR006186 GO:0016787
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 124 148 IPR006186 GO:0016787
Pste8g01339 315 PRINTS Serine/threonine phosphatase family signature 266 282 IPR006186 GO:0016787
Pste8g01339 315 Gene3D - 5 313 IPR029052 -
Pste8g01339 315 Pfam Calcineurin-like phosphoesterase 62 254 IPR004843 GO:0016787
Pste8g01339 315 ProSitePatterns Serine/threonine specific protein phosphatases signature. 125 130 IPR006186 GO:0016787
Pste8g01339 315 SMART pp2a_7 34 304 IPR006186 GO:0016787
Pste8g01339 315 SUPERFAMILY Metallo-dependent phosphatases 22 308 IPR029052 -
Pste8g01339 315 Pfam Serine-threonine protein phosphatase N-terminal domain 13 60 IPR031675 -
Pste8g01339 315 FunFam Serine/threonine-protein phosphatase 60 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01339 Pste-Chr8 7196424 7201033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01339 63 247 Calmodulin-binding Proteins AT5G63870 32.273 1.65e-27 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01339 8 7196424 7201033 Pste8g01339 8 7196424 7201033 ECH