Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01329 ATGGCTAACAAAATTAATGCTTTGTTTGTCATGGGTTTTGTCATCATAAGCCTTATGTCGGTTACATCTGCGATTTCTGGAACTGCCACTTATTATACTGTTTACACACCATCTGCATGCTACGGGTTCCAAGATCAGGGAACAATGATAGCAGCTGCAAGCGATGCAATATATGCGAATGGAGCAGCATGTGGTCAAATGTATAGGATCACATGCACGGGTCGGACCAACGAGGGTGTGCTTCAGCCATGCAAGGGTGGGAGTGTTACGGTGAAGATTGTGGATCGTTGCCCTTCCCCCGGTTGCCAATCCACCATTGATCTCTCCCAAGAAGCTTTCTCCGCAATCGCTGACCTCAACGCTGGAAAAATTCAAATTGACTACACCAGGGTGTGATGCAGATCAATAACCTTATGCCCATCCCACTAATTAAATAATATTTTGAATGTACGCATATAGGTACAAGAATAATTGTATGAGATGGAAAATAAAACGTCTTCCATTGCAACTGTTATATGAATAAAACATTTGATCCCATGGAGTCTTTTTAATTAACTTAATGCTACCCATGCATTTTTTAAAGTAAGTTAATAAATGATCAGTATTTGTATTTG 614 0.4039 MANKINALFVMGFVIISLMSVTSAISGTATYYTVYTPSACYGFQDQGTMIAAASDAIYANGAACGQMYRITCTGRTNEGVLQPCKGGSVTVKIVDRCPSPGCQSTIDLSQEAFSAIADLNAGKIQIDYTRV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01329 131 CDD DPBB_EG45-like 25 129 - -
Pste8g01329 131 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
Pste8g01329 131 SMART dpbb_1 50 128 IPR007112 -
Pste8g01329 131 Gene3D - 15 131 IPR036908 -
Pste8g01329 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Pste8g01329 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 129 IPR044206 GO:0009627|GO:0048046
Pste8g01329 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Pste8g01329 131 FunFam Barwin-related endoglucanase 24 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01329 49 130 Expansin Gene Family AT2G45110 33.696 1.88e-09 52.0