Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01302 ATGCCTTTCATCCAAGTCACTCTTCTAGCAATAATAGCTTTCCTCTCAGTTAAACTCTCCATGGCTCACCCTCGCTTCCATTTTGGGTGGGGTGGTCATCATGGGGGGATATCTTTTGGTCTTTCACCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTTTTGGAGAAGGCCATTGCAAAGGACATGCGAATGGCTGCTTCTCTACTTAGACTTCACTTTCACGATTGCTTTGTGCAGGGCTGCGATGCATCAATTTTATTGGATGATAGCGCAAGAATAGTAAGTGAAAAACATTCTGGACCTAACAAAAATTCTGTCCGAGGTTTCGAAGTAATTGATGAGATAAAGTCTAAGTTGGAAGAAGCATGTCCTCGGACTGTGTCTTGTGCAGACATTCTCGCCCTTGCTGCCAGGGCCTCCACGGTTCTTGTAAGAGAACACAATTCCCTCTAATTGAAGCAACTCACAATTATCCACTTTGCATGTCACAGAATATATACGTGATGTTTAAGTGTTTAACACACTGC 548 0.4288 MPFIQVTLLAIIAFLSVKLSMAHPRFHFGWGGHHGGISFGLSPQFYQFSCPQANDIVMSVLEKAIAKDMRMAASLLRLHFHDCFVQGCDASILLDDSARIVSEKHSGPNKNSVRGFEVIDEIKSKLEEACPRTVSCADILALAARASTVLVREHNSL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01302 157 PANTHER PEROXIDASE 72-RELATED 40 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 SUPERFAMILY Heme-dependent peroxidases 40 151 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 Pfam Peroxidase 59 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Pste8g01302 157 Gene3D - 41 156 - -
Pste8g01302 157 ProSiteProfiles Plant heme peroxidase family profile. 40 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01302 157 FunFam Peroxidase 44 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01302 Pste-Chr8 6888040 6888995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01302 6 150 Peroxidase AT1G44970 70.946 3.06e-72 219