Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01268 ATGCCGTCTCCTGCACCCACCCTCGTCTCCAAATGCATAGTCTTCCCAGACCAAAAGTCCACTCTCGGAAACCTCAAACTCTCTGTTTCGGACCTCCCCATGCTGTCCTGCCACTACATCCAAAAGGGTTGCCTCTTCACCCAACCCAATCTTCCAATCCACTCTTTAATTCCTTTTCTTAAATCCGCACTCTCTCGCACACTTTCTCTCTTTCCCCCACTCGCTGGCCGCTTAACCACCCATTCCAACGGTTACGTCTACATCGCTTGCAACGACGCCGGCGTCCATTTCATCCACGCCAATGCCACCGCCCTCCGCATCTGTGACTTACTTTCCCCACTCGACGTCCACGAATCCTTCAAACAATTCTTTACCTTCGATACCAAAGTCAGCTACACCGGCCATTCCTCTCCAATTCTCGCCGTTCAGGTCACTGAACTCGCCGACGGCCTATTCATCGGCTGCGCCGTCAATCACGCCGTCACCGACGGCACCTCCTTCTGGAATTTCTTCAACACCTTCGCTCAGCTCACCAGAGGAGCCACCAACTGCATCCGCAATATACCGGATTTCCATCGCCAGTCCGTTCTGATCTCAGACGCCGTTCTCCGCTTGCCGGAAGGCGGTCCTCAGGTCACCTTCGATGCTGATGCTCCTCTGCGTGAAAGAATCTTCAGTTTCAGCCGCGAATCCATTCAGAAGCTTAAAGCAAAAACGAACAACCGCCGCTGGCCGGTGAACAACACTTCCGGCGAGTTGATGCGGAAGCAAAACCACGATCATTACGCGAAGGAGAACAACGGCAAGGCTAACACAATTATGGACAACTGGTTCAAGGTTAATTCGAATTCAAAACCACAAACAGTTAGCGAAACGGTGGAGATTTCGTCGTTTCAATCGGTGTGCGCGCTCTTGTGGCGCGCGGTCACGCGGGCTAGGAAATTGCCTGCTTCAAAAATGACAACGTTCAGAATGGCAGTTAACTGTCGCCACCGTATAGAACCAAAATTGGAAGCATACTACTTCGGAAACGCAATTCAGAGCGTGCCTACTTACGCATCCGCTGGTGACGTGTTATCTAAGGATCTTCGGTGGTGCGCGGAGCTGCTTCACAACAACGTGAAGGCCCACGATGATGCTATGGTGCGGCGCTTCATAGACGATTGGGAGCGGAACCCGAGGTGCTTCCCACTTGGTAACCCTGACGGTGCATCCATCACTATGGGCAGTTCTCCCAGGTTTCCAATGTACGATAACAACTTCGGATGGGGGAGACCTCTGGCGGTGAGAAGTGGAAAAGCCAACAAATTTGACGGTAAGATCTCTGCATTTCCCGGTAGGGATGGCACAGGAACCGTTGATTTGGAGGTTGTTTTATCCCCCGAAACCATGGTGGCGCTCCAGTCCGATCCTGAGTTCATGAAATACGCAACGTGTCAATTATAA 1446 0.5207 MPSPAPTLVSKCIVFPDQKSTLGNLKLSVSDLPMLSCHYIQKGCLFTQPNLPIHSLIPFLKSALSRTLSLFPPLAGRLTTHSNGYVYIACNDAGVHFIHANATALRICDLLSPLDVHESFKQFFTFDTKVSYTGHSSPILAVQVTELADGLFIGCAVNHAVTDGTSFWNFFNTFAQLTRGATNCIRNIPDFHRQSVLISDAVLRLPEGGPQVTFDADAPLRERIFSFSRESIQKLKAKTNNRRWPVNNTSGELMRKQNHDHYAKENNGKANTIMDNWFKVNSNSKPQTVSETVEISSFQSVCALLWRAVTRARKLPASKMTTFRMAVNCRHRIEPKLEAYYFGNAIQSVPTYASAGDVLSKDLRWCAELLHNNVKAHDDAMVRRFIDDWERNPRCFPLGNPDGASITMGSSPRFPMYDNNFGWGRPLAVRSGKANKFDGKISAFPGRDGTGTVDLEVVLSPETMVALQSDPEFMKYATCQL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01268 481 Gene3D - 7 204 IPR023213 -
Pste8g01268 481 Gene3D - 219 472 IPR023213 -
Pste8g01268 481 Pfam Transferase family 7 474 - -
Pste8g01268 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 474 - -
Pste8g01268 481 SUPERFAMILY CoA-dependent acyltransferases 35 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01268 Pste-Chr8 6713436 6714881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01268 60 464 Monolignol Biosynthesis Gene Families AT5G48930 27.184 4.20e-34 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02166 7 19937002 19938703 Pste8g01268 8 6713436 6714881 ECH
Pste8g01268 8 6713436 6714881 Pste8g01268 8 6713436 6714881 ECH
Pste8g01268 8 6713436 6714881 Pste7g02166 7 19937002 19938703 PCT