Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01242 ACCCAAACCGTCACTTGAGATCTTCTTCTCTTTACCACTTCGGCGACCTCCGTTCTTCTTCGTCGGCGACGCACTTAGGGGCAGCAATGGCAGGGAAAGTGGCAAAGGCAGCATACGATGCAAAGATGCTGAAGCTTCTAAGAGAGTACAGTCAGGTGCTGGTGGTTTCGTCGGACAATGTGGGTTCTAACCAGCTTCAGAGCATACGGAGGGGACTTCATGCTGATTCAGTGGTGGTGATGGGGAAGAACTCCATGATGAAACGCTCTATCATCTTGGATGCTCAGAACACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCGTTAATTTTCACCAAAGGTGACTTGAGGGAGGTTGGCGAACAAATTGCCAAGTACAAGGTCAATTCATTGCGTGACAGTCATGTTTGTAGAGGAGCAAAAATTGAGACCCCTGTCCTTTTTGTTCAACCCATTCTTATGTGCCCCAAGTACACATCGTATGACACATACCACAATTGTTCTTATATGCAATCTGGACAGCTGCCTTTGGGCCTCACATGTTGTAATCATCAGTCTTCACAGGCTTCTGAGCCTTTTCTTGTATGCTCAAAATTCATGCCACACCAACATTGCTTCTTGATGAGATCAAGACAGTTCCTGATGACGAGTATATTGTCTCCTCTTCTCCTTTTGGGTGGGATCCACCCACCGACTCCAACATCATCAATGGCACCAAAACAAACCAAGGCAGAGAAGAAAGTCGCTTACGATGCTAAGCTGTGCGAGCTTTTGGAAGAGTACGGCCAGATCCTCGTTGTCAACGCTGACAACGTTGGATCTAACCAACTTCAGAACATTCGCAAGGGTCTCCGTGGCGACTCTGTTGTCCTCATGGGGAAGAACACCATGATGAAGCGCTCCGTCAGAATTCACGCCGACAAAACCGGCAACAGTGCCTATCTTAACCTCGTCCCCCTCCTTGTCGGTAATGTGGGTTTGATTTTCACCAAAGGTGACTTGAAGGAGGTCAGTGAGGAGGTTGCTAAGTACAAGGTGGGAGCTCCTGCTCGTGTTGGTCTGGTTGCTCCAATTGATGTCGTTGTTCCTCCAGGCAACACAGGCCTCGATCCCTCTCAAACCTCTTTCTTCCAGGTGCTCAATATTCCCACAAAGATTAACAAGGGTACTGTGGAAATTATTACCCCAGTTGAGCTCATTAAGAAGGGAGAAAAGGTTGGCTCCTCTGAAGCTGCACTCCTTGCCAAGCTAGGCATCAGACCCTTCTCATATGGGCTTGTGGTTCTCTCTGTCTATGATAATGGGTCAGTGTTCAGCCCCGAGGTTCTTGATCTCACTGAAGATGACCTCCTTGAGAAGTTTGCTGCTGGTGTTTCAATGGTGACGTCACTTTCGTTGGCTGTCTCATACCCAACACTTGCGGCTGCACCACACATGTTTGTCAACGCCTACAAGAACATTCTTGCTGTGGCTGTTGAGACAGATTATTCTTTCCCGGAGGCAGACAAGGTCAAGGAATATCTCAAGGACCCAAGTAAGTTTGCTGTGGCTGCTGTTGCTGCTCCTGTTGCTGATTCTGGTGCTTCAGCGGCCTCTGCCAAGGAAGAAGAGAAGAAGGAAGAGCCAGCTGAGGAGTCGGATGATGACATGGGTTTCAGTCTCTTTGACTAATAATCCATGTAATACTGTTGAGTTTGTTTTATTAGAACTGAAGTTTGTCTTTCATTTTAGGTGTTATTTTAGTTTGCTATATTTTCTCCATTGATGTTACATTGAGACTAGTTTTAATTTTAAAGTTCCCTTCAGTTAAATAAGGTTTACCGTGATTGTGCCTCGAATGGATTTAAATCGTAATGCTTGTTAATTTACAAATCCATTTTCATTGATGCTGCCAAACTGGACTGATTGTTGGGTTCCTGGTGTGGTGCTTAAATGCCAGCACTTGCCCAAATCAGAAGAAAGCTGTGATTAACAGCTCACAAGGAATTTAATTTGTCTGAC 2021 0.4617 MAGKVAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQSIRRGLHADSVVVMGKNSMMKRSIILDAQNTGNKAFLNLVPLLVGNVALIFTKGDLREVGEQIAKYKVNSLRDSHVCRGAKIETPVLFVQPILMCPKYTSYDTYHNCSYMQSGQLPLGLTCCNHQSSQASEPFLVCSKFMPHQHCFLMRSRQFLMTSILSPLLLLGGIHPPTPTSSMAPKQTKAEKKVAYDAKLCELLEEYGQILVVNADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNSAYLNLVPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAAGVSMVTSLSLAVSYPTLAAAPHMFVNAYKNILAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPVADSGASAASAKEEEKKEEPAEESDDDMGFSLFD 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01242 534 Gene3D - 220 423 IPR043141 -
Pste8g01242 534 Pfam 60s Acidic ribosomal protein 448 533 - -
Pste8g01242 534 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 218 517 - -
Pste8g01242 534 Gene3D - 3 124 IPR043141 -
Pste8g01242 534 MobiDBLite consensus disorder prediction 505 534 - -
Pste8g01242 534 CDD Ribosomal_P0_L10e 223 399 - -
Pste8g01242 534 SUPERFAMILY Ribosomal protein L10-like 222 348 IPR043141 -
Pste8g01242 534 Pfam Insertion domain in 60S ribosomal protein L10P 328 397 IPR040637 -
Pste8g01242 534 Pfam Ribosomal protein L10 6 104 IPR001790 -
Pste8g01242 534 Pfam Ribosomal protein L10 221 322 IPR001790 -
Pste8g01242 534 Gene3D - 328 399 IPR043164 -
Pste8g01242 534 MobiDBLite consensus disorder prediction 519 534 - -
Pste8g01242 534 SUPERFAMILY Ribosomal protein L10-like 7 136 IPR043141 -
Pste8g01242 534 FunFam 60S acidic ribosomal protein P0 327 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01242 Pste-Chr8 6587197 6598731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01242 215 533 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 83.699 0.0 521