Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01224 AAAGAACAAAAGTGGTGGGATACGAAAATATCCGCATTTATTTCTTCCTTTCAGATGGATACACTCTCACCCTTCCATTAATCTTCCCTCCTTGAAATTCTAAATCTTATTGTTTTTCTTCTTCTTCTCTCTATGGTCTATATAATATACACACAACACAAAATTCATATATATTGGTAAATACACGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGTTGCGGTGATGGCATGTATCTTAGCAGTAGCACTCTTTATTGTTCTGGTATCCGCCTTACTTCTCTTACTGTACCACCGATCCCGCAACCGGCGGCTGGGCCTGCCGCCGGGGAGCTTGGGACTACCCTTTGTGGGTGAGACCTTGCAACTGATATCGGCTTATAAGAGCGAGAACCCAGAGCCGTTCGTGGACCAGCGGGTGAGCCGGTACGGTCCAATCTTCAGCACCCACGTGTTCGGGGAACCGACGGTGTTCTCGGCTGACCCGGAAACGAACCGCTTCATCTTGCTCAATGAAGGGAAACTCTTCGAATGCAGCTATCCCGGTTCCATATCCAACCTTCTCGGGAAACACTCTCTTCTCCTCATGAAGGGTTCTCTTCACAAAAGAATGCATTCCCTCACCATGAGCTTCGCCAACTCCTCCATCATCAAGGACCATTTACTCCTCGACATAGACCGCCTCATCCTCCTCAACCTCCATTCCTGGACCCACCGTGTTTTTCTTATGGAAGAAGCCAAGAAGATAACGTTTGACTTGACATTGAAGCAGTTGATGAGCTTTGATCCAGGTGAATGGAGTGAGACACTGAGGAAAGAGTACGCGCTTGTGATCGAAGGATTTTTCTCACTTCCCTTGCCTCTCTTTTCACCTACCTACCGCAGAGCCATCAAGGCTAGAGGAAAGGTGGCAGAGGCAATAACGTTGATAGTGAGGCAGAGAAGAGTAATGGGGGAGAAAAAGAATGACATGCTAGGGGCATTGTTGGCCTCCGGCGACCAGTTTTCGGACGACGAAATTGTGGATTTTATGGTGTCTTTGCTCGTCGCCGGCCATGAAACCACCTCTGTCATAATGACTCTTGCCGTCAAGTTCCTCACCGAGACTCCTGTAGCGTTGGCACAACTCAAGGAAGAGCATGACCAAATAAGAGACAAGAAGAGTTGCTCGGAGGCACCACTGGAGTGGACAGATTATAAGTCAATGGCATTTACTCAATGCGTTGTGAACGAGACTTTGAGAGTTGCAAACATAATTGGTGGGATATTTAGGAGAGCGATGACAGACATCAACATAAAAGGTTACACTGTTCCAAAGGGATGGAAGGTCTTTGCTTCATTTCGTGCTGTACATCTAAACCCCGAGCATTACAAAGATGCTCGCACTTTCAATCCATGGAGATGGCAGAGTAACTCGGAAACAATTAACCCTGGGAATTTATACACCCCTTTTGGTGGAGGTCCGCGGCTATGCCCTGGCTATGAGCTTGCCAGAGTGGTGCTCTCTGTCTTCCTTCACCGCATGGTCACCCGTTATAGTTGGTATCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTAGGATGCAGAAGAAGTATCCTATCATAGTGAAGCGTAGGGAGGAGTTCTAACCAAGTAAATCACCTTGAGGGCACCACACACAAAAGAAGAGATTGTAGATGAGTTTAATCAGTTTAATGTCCATTATATTAAGCAATAAAGTTAAATCCGCTGGTATAGTAGTTTATATATTATTTACTGTAGGACTCATAGGAAGGAATATTTTAGTAGACCTTAGGAGATGGGAAATGAGGATGTCCAAAGATCAAAGCCCCACCACTCTAATAAAACACTTGAGCTAAATCTACCTATGTATATGATCTTAAGTAAATCATATTAAAAAATTCCATGGTGTA 1920 0.4536 MACILAVALFIVLVSALLLLLYHRSRNRRLGLPPGSLGLPFVGETLQLISAYKSENPEPFVDQRVSRYGPIFSTHVFGEPTVFSADPETNRFILLNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLLDIDRLILLNLHSWTHRVFLMEEAKKITFDLTLKQLMSFDPGEWSETLRKEYALVIEGFFSLPLPLFSPTYRRAIKARGKVAEAITLIVRQRRVMGEKKNDMLGALLASGDQFSDDEIVDFMVSLLVAGHETTSVIMTLAVKFLTETPVALAQLKEEHDQIRDKKSCSEAPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTVPKGWKVFASFRAVHLNPEHYKDARTFNPWRWQSNSETINPGNLYTPFGGGPRLCPGYELARVVLSVFLHRMVTRYSWYPAEEDKLVFFPTTRMQKKYPIIVKRREEF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01224 469 PANTHER CYTOCHROME P450 26 28 440 - -
Pste8g01224 469 Pfam Cytochrome P450 207 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 Pfam Cytochrome P450 33 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 CDD CYP90-like 64 465 - -
Pste8g01224 469 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Pste8g01224 469 Gene3D Cytochrome P450 22 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 SUPERFAMILY Cytochrome P450 24 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste8g01224 469 FunFam Cytochrome P450 90A1 22 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01224 Pste-Chr8 6490989 6496906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01224 121 467 Cytochrome P450 AT5G05690 78.063 0.0 568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01224 8 6490989 6496906 Pste8g01224 8 6490989 6496906 ECH
Pste7g02184 7 20136400 20140724 Pste8g01224 8 6490989 6496906 PCT