Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01219 CACACAGCACACTCTCTTCATAACTGCCATTAACGCACACCTTACTTTTTCAGAGAACACTTCCACAGTCACACACTCTTCACTCTTTCTCTTTCTCTTTCTCTTTCCAAAGCGTTCATTAATGTCTTGATGAATTAGAAACAAAGTTAGACTTGTGGCAGTTGTAGGAATCATTAATGCACTATCCATTCTCCTTACACCCATTTAATGTTTAGTTGCACCTCTGTTTCCAAATCACCACCCCTTTTCATTTCATCATGTAAAACACACCAAAACATTACATCAAATACAACCTTAAACATGCTAAAGCCTGTGTTTCATCCACGCTCGTGCCACCAAATAAAAAAAACACACACATTCTTGACATTAATGGATCCATTGTGTCGGAATTTCACAAGAGACAGCTGAACAACATCGTCATCTGCTCTCTGTGGGTCGATTTTGCTGAATTCAACTAAACTCGTGCATGCAGACCAAGTGAAGTGAGGTGAAGTTTACTATCAAGCGATACAAAATTGTTTCAATTTAACTGCTAGTCTTCAGTTCAAATTAAAGTAGGCAACTGTGTTTTGAGTGCGGGGGAATTTTGCTGTCTATAGTAGTTTTATTCGTTGGACTTTAACAAAATTATCTATTGTAGACGATAATTGTGTGTGAAAAAAGTGAAGTTGAGTTTTAGTATTATGGAAATGGGAAGAATTGTAGTGAGTGTGGTTACAATGTTGTTAATGGTTGGGTTGACAATGGGAATGGGTTTGAGTTCGAGAACGGAATTGTTTGCGTTAAGGAAACTTCGGTCATCGTTGGGGATTAGGGCAAAGTATTGGCCCATAAAAGCCGAACCATGCGGGAACTGGACAGGGGTTCAGTGTCGGAATGGTCGAGTTGTGGGTATAAACGTGTCCGGTTTGAGGAGAACAAGGTGGGGTAGGCTTAACCCAGGTTTTGAAGTGTATGCTCTTCAGAATTTGACCCTCTTGGAATCGTTTAATGCTTCTCGGTTTATGCTTAATGGGTCTATTCCCGAGTGGTTGGGTGGGAGCCTTGGTTTGTTGAAGGAGCTTGACCTTAGCTTTTGTTCTATAACGGGTTTGATTCCTGATTCGATTGGGGGGTTGAGTGAGTTGAGGGTTTTGTTGCTTTCAGGGAATTTTCTCGCAGGTAGAATGCCTTCAACGCTTGGGAACCTCACAAACCTTTCTGTTGTTGATCTCTTTGGCAATTCTCTTTCAGGGCCTGTGCCTGATTCTGTGTCTAAACTTAGGAACCTCACAAGGCTTGATCTTGCTAATAATTTCTTTTCTGGGCCTGTTCCACCTGATTTGGGTGCCCTCTCTACTCTTCAAGTTTTGAACCTTTCTTGGAATTCTTTTACTGGATCGGTTCCCGTTCAACTGGGTAACCTTTCCAGTTTGACTGAGGTTGATCTTAGTATCAATTTTCTGGAGGGGCCGTTGCCGGGTGATTTGTTTTCTTCTCGGCTTTTGGCCCTTAAGGTACTCATGCTCAGAGGGAATTTGTTTGATGGTGCTCTTCCTGCTACTGTGAGGTCAATGCCCAGGTTGCAGTTTCTTGATGTGTCCAGTAACAACCTCACTGAGAAGCTGCCGAATTTCGCAAGTTGGAATGTTAGTTCTGCTGGTGTTGTGTTCAATTTGTCAAACAATTTGTTCTATGGACTTCTGAATACTTCACTGGACAGGTTTAAAACGATTGACTTATCAGGTAATTATTTGGAAGGTGAGGTGCCAGGTGGAGTAGATGGTGTTAGTAATGTTACTCTGGATAGAAATTGCCTACAGATGATTTCAAACCAAAGGAGTTTGGAAGAGTGTAGAGGTTTTTATCTTAGGAGAAATTTACCCTTTGCATTCCCAGAATCCGACTCGGGGAGCCGTAGATGGCTGATATTCATACTGGTAGGAATATTTGGTGGGCTTGGCTTTATTGTGCTGCTGGCATTGGTACTCATGCTTGTTCTAAAACAGTGTCGTCGTAGTCGTAGTCGTAGAAGCTTGGAAGTTGAAAAGGGGACCAAAGATGGGGGGCCTGTTCAAGATGGGGAAAGTCCTATACCTCCTAAGGATATTGATTTTGTGCCTGGCGTGGGAGAAGCGTTTAGTTTTGAGCAAATGATCCAATTGACTGCCAATTTTGCTGAAGCAAATCTCATAAAGCATGGTCATTCTGGGGACCTCTTCTTGGCAGTCTTGGAAGGTGGAGCAAATGTGGTTGTCAAAAGGGTAGACTTGAATGTATATAAGAGAGAATCGTATGTCGTGGAATTGAAACTAATAAGTAAGGTTTCACATGCAAGATTGGTCCCAATCCTGGGCCACTGCTTGGACAATGAGAACGAGAAATGTATAGTTTACAAGTACTTGCCAAATAGAGATTTAGCTACTTCTTTGCACAGAATCACTGGTTCAGATGGTAAATTACAGTCCCTAGATTGGATCACAAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACCTACATGAGTGCAGTCCTCCCCTTATCCACAGAGATATCCAAGCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACTTCCCAAGGAGATCTTCAACAAGGAGTCATCTCAAGGGTTTTCAGCAAGCCACCAACTTCTAATCAAGGTGATTCTGGTAAATTATCGGCGACGTGCGCCTACGACGTCTACTGTTTTGGGAAGATTTTACTCGAGCTTGTTACTGGAAACATTGAGGTCAGCAAGTCAGATGATGCCACTACAAAAGAGTGGTTAGAGCAAACCTTGCCTTATATCACTATATACGATAAAGAACGGGTGACTAAGATTGTTGACCCATCATTGATCGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAATGCATGCTTGAATCCCAGGCCTTCCAAACGTCCTCCTATGAGGCATGTCCTGAAAGCATTGGAAAATCCATTGAAGATTGTGAGAGAAGAAAATATTAGCTCAGCAAGGTTGAGAACAAACTCTTCTAGGAAATCTTGGAGCACTGCGTTCTTTGGTAGCTGGAGACACAGCTCATCAGACAGTGTTGTTGCCGCAACACATACAAACAAAGAGGGTAGTAGTGATACTAAAAAATCAGGAAAAGTAGGTTCTCAAAGTAGTGGAAATGATCACTCATCTTCCAATAAAAGGTCATCCAATGAAATTTTCCCTGAACCATTGGAAATACAGGATGTGGAGACTGGAGAGGCAAGATAAGCAATTGAGAAATGGATTTGGTTATTCTTTGGTGGTGAGGTAGCAATTGCTTGTTATTAGCATCTCAAACTCACTACCCACCATCCATTATGGTCCATGTTGATGCAATGGAAAACCTTAATACTGCTAGTGATAGCTTTTGCTTTAAAAGGCTTGGATTAAGCACTAGTCATTCAATTGTCTAGTATATGATAGCTCCTCAAAAAACAATATTTTTACTCATTCAACAGATTTGTTTGAAACACAAAACCCTCTCTTATGTCAAAGAATGCGTGACAAAATGTAAAATAACGAGAGGGTTTTCATTTTTACGAGGAATTGGAAGTGGGATAAACGTTGTGTTACTCGTGATTTTCTTTGGCCGGTTATATGTATTTAGCATTGTAAATCTTCTTGAACTTTGTTGCCGTTTAGTTAGTACTATATTAGTTAGTAAGTCATGTGCTTACTAGAGGCTATCTATGCAAGTTCATGATGTATTATCAAAACACAACAGACTCGCCACTCTGCAAAAGTTGTCATCATATCTAGTAGCATCTATTATGTTATTGATGAATTATTTGAGCTCAACTCATAAATCCTCATCAAACTCATTTGTTTTAGTAAACAAACCATCTGATTTAG 3908 0.4089 MEMGRIVVSVVTMLLMVGLTMGMGLSSRTELFALRKLRSSLGIRAKYWPIKAEPCGNWTGVQCRNGRVVGINVSGLRRTRWGRLNPGFEVYALQNLTLLESFNASRFMLNGSIPEWLGGSLGLLKELDLSFCSITGLIPDSIGGLSELRVLLLSGNFLAGRMPSTLGNLTNLSVVDLFGNSLSGPVPDSVSKLRNLTRLDLANNFFSGPVPPDLGALSTLQVLNLSWNSFTGSVPVQLGNLSSLTEVDLSINFLEGPLPGDLFSSRLLALKVLMLRGNLFDGALPATVRSMPRLQFLDVSSNNLTEKLPNFASWNVSSAGVVFNLSNNLFYGLLNTSLDRFKTIDLSGNYLEGEVPGGVDGVSNVTLDRNCLQMISNQRSLEECRGFYLRRNLPFAFPESDSGSRRWLIFILVGIFGGLGFIVLLALVLMLVLKQCRRSRSRRSLEVEKGTKDGGPVQDGESPIPPKDIDFVPGVGEAFSFEQMIQLTANFAEANLIKHGHSGDLFLAVLEGGANVVVKRVDLNVYKRESYVVELKLISKVSHARLVPILGHCLDNENEKCIVYKYLPNRDLATSLHRITGSDGKLQSLDWITRLKIAIGAAEGLAYLHECSPPLIHRDIQASSILLDDKFEVRLGSLSEVTSQGDLQQGVISRVFSKPPTSNQGDSGKLSATCAYDVYCFGKILLELVTGNIEVSKSDDATTKEWLEQTLPYITIYDKERVTKIVDPSLIVDEDLLEEVWAMAIVANACLNPRPSKRPPMRHVLKALENPLKIVREENISSARLRTNSSRKSWSTAFFGSWRHSSSDSVVAATHTNKEGSSDTKKSGKVGSQSSGNDHSSSNKRSSNEIFPEPLEIQDVETGEAR 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01219 866 SMART LRR_typ_2 241 265 IPR003591 -
Pste8g01219 866 SMART LRR_typ_2 291 315 IPR003591 -
Pste8g01219 866 SMART LRR_typ_2 267 290 IPR003591 -
Pste8g01219 866 SMART LRR_typ_2 121 144 IPR003591 -
Pste8g01219 866 SMART LRR_typ_2 145 168 IPR003591 -
Pste8g01219 866 SMART LRR_typ_2 193 217 IPR003591 -
Pste8g01219 866 SUPERFAMILY L domain-like 39 312 - -
Pste8g01219 866 MobiDBLite consensus disorder prediction 444 465 - -
Pste8g01219 866 Gene3D Ribonuclease Inhibitor 189 393 IPR032675 -
Pste8g01219 866 ProSiteProfiles cAMP/cGMP binding motif profile. 496 549 IPR000595 -
Pste8g01219 866 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Pste8g01219 866 MobiDBLite consensus disorder prediction 826 849 - -
Pste8g01219 866 FunFam Leucine-rich repeat receptor protein kinase EMS1 187 269 - -
Pste8g01219 866 PANTHER OS05G0588300 PROTEIN 167 259 - -
Pste8g01219 866 FunFam Predicted protein 463 566 - -
Pste8g01219 866 Pfam Leucine Rich Repeat 124 145 IPR001611 GO:0005515
Pste8g01219 866 SUPERFAMILY Protein kinase-like (PK-like) 471 768 IPR011009 -
Pste8g01219 866 MobiDBLite consensus disorder prediction 810 866 - -
Pste8g01219 866 Gene3D Phosphorylase Kinase; domain 1 468 566 - -
Pste8g01219 866 ProSiteProfiles Protein kinase domain profile. 491 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01219 866 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 90 186 - -
Pste8g01219 866 FunFam Putative LRR receptor-like serine/threonine-protein kinase 567 788 - -
Pste8g01219 866 Pfam Protein tyrosine and serine/threonine kinase 497 766 IPR001245 GO:0004672|GO:0006468
Pste8g01219 866 Gene3D Transferase(Phosphotransferase) domain 1 568 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01219 Pste-Chr8 6459964 6465026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01219 19 659 Miscellaneous Gene Families AT2G16250 47.283 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pste8g01219 PK_Tyr_Ser-Thr 2e-18 CL0016