Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01210 ATGAAGAAGAATAAATCACCCTTCTCCGCCCCCACCCTCACTCTCTTCACCGCCACCCTCTTTATCCTCTCTTCACTACCCCTCTCCCTTGCCCTCGGTTCCGCCGCCACCCTCGCCGTCACCTCCTCCTCCGTCTGCGGCGTGGTGGCATCTGAGCCGACGCGGCGCATTGCGTGCTATCGCCGCGGCGAGTTGATCGCCGTCGCCCCCAATGTCTCATTCTCGGAGATCTCCGGCGGCCGGAGCTACTTCTGTGGCCTTCGGTCCGGCAACTACAGCCTCCTCTGCTGGGACGCCCTATCCAGCTTACAAAGCAAGAGACTTTACAACAATGGCACTGTTCTATTCGAGAATCTGGCTCTCGGAGACTCCCAGGTTTGCGCCACCGTGGTCGGCACTGGAACGGCGTCGTGTTGGAGAACCAATGATGCGTTTAAATTGCCTTCTGGGTTGGACCAGTTTTCATCTATTTCATCTGGGTTGGGTTTCTCTTGCGGAATTTTAAAAGGTAATGATCGGGTTCGGTGTTGGGGTGTTGGGTCAGTGGCGAGAAGAATGGAGAGTGAGTTTGGGAATATGTCTATGGTGAGTCTTGTGGCTGGGGAGTCACATGTTTGTGGGTTGAATTCCAGTTGGTATTTGGTTTGTAGAGGAAGTAATGATTTTGGTCAAATTGATGCTCCTCAAGGAGGGGCTTTAGAGTTTTCTGATTTGGCGCTTGGAGCTGAGCATAGTTGTGCTATTAGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGCTGTTTGATGTTAATGTTACAAAAGGTGTTTCTTTTGAGGCCATTGTTTCAGCGTCCAATTTTACTTGTGGATTGACAACTAACAATTTTTCAGTCATTTGTTGGGGCCCTGGTTGGACTAATGGTTCAGGTTTAGAGATTCCTTTGCCTGCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGGATATATCCTCAATCCGAATCTTTGTGTTCTGGTTATGGTAACATCTGTAAGCCAAAACCTTGTTGGCCTCAAATGCCAGGGCCAGAGCCACCGCAAAGGGAACCACCTTCAGAGTGGGAGGTGCCACCTGCTTCTCCGTCGAATGCCTTGACAAAGGGGTTATTGGCATTTGCCATTGTTGGATCTGTGGGGGCTGTTGCTGGGATATGCACTGTGATTTATTGTTTGTGGACTGGGGTTTGTTTTGGGAAGAAGAAAATTCACAATTCGGTGCAGCCAACAATAACCAGAGGCGGTAGTGTAAATGGTGGGGGTGGTTCTCATAATAGTAACAGTCCACCTTCCAGATCATCCACCATTAGGCGGCAAGGGTCACGGATAATGAGGCGCCAAAGGAGTGGAACCTCATCCACAAAGCATCCCGAGAGGGCTGAGGAGTTTACCTTTGCTGAACTTGTTGCAGCCACAGATAATTTTTCCATTGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTTTATAGAGGCAAACTTGCAGATGGTCGAGAGGTGGCAGTCAAGAGGGGTGAAACTGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCCTTCTTGTCCCGGTTACATCACAAGCACTTGGTAAGGCTGGTGGGATTTTGTGAAGAGAAAGATGAGAGGCTTTTGGTGTACGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAGAAACAATGTCGACAAGGGCAGTAGTGTGTTGAATTCTTGGAGAATGAGGATCAAGATCGCACTGGATGCTTCGCGAGGTATTGAGTATCTCCATAACTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCCAACATTCTCATTGATGCAACTTGGACGGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCTGAGTCTGATCATGATTACCGGCCAATAAAGGCAGCGGGAACAGTTGGATACATCGATCCTGAATATTATGGTCTAAATGTATTGACAGCTAAGAGTGATGTCTATGGGCTTGGAGTGGTACTGCTAGAACTATTAACAGGAAAGAGGGCTATATTCAAGAGTGATGAAAATGGAGGCACGCCAGTGAGTGTGGTAGACTTCGCTGTGCCAGTAATTATTGCAGGAGAACTGGCAAAAATTTTGGACCCTAGGGTTGAGCCACCACAGCTGAATGAAACAGAAGCGGTGGAGCTAGTTGCATATACTGCTATACATTGTGTCAATTTGGAAGGGAAAGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGAGCTTTGGCCCTTTGTGATAGTAGTCATGGCAGCATTTCCAGCGGAACAATCTCCATTGTATCTGACTAA 2391 0.4755 MKKNKSPFSAPTLTLFTATLFILSSLPLSLALGSAATLAVTSSSVCGVVASEPTRRIACYRRGELIAVAPNVSFSEISGGRSYFCGLRSGNYSLLCWDALSSLQSKRLYNNGTVLFENLALGDSQVCATVVGTGTASCWRTNDAFKLPSGLDQFSSISSGLGFSCGILKGNDRVRCWGVGSVARRMESEFGNMSMVSLVAGESHVCGLNSSWYLVCRGSNDFGQIDAPQGGALEFSDLALGAEHSCAIRRSNGSVVCWGGRGLFDVNVTKGVSFEAIVSASNFTCGLTTNNFSVICWGPGWTNGSGLEIPLPAILPGPCVQSSCSECGIYPQSESLCSGYGNICKPKPCWPQMPGPEPPQREPPSEWEVPPASPSNALTKGLLAFAIVGSVGAVAGICTVIYCLWTGVCFGKKKIHNSVQPTITRGGSVNGGGGSHNSNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFTFAELVAATDNFSIENKIGAGSYGVVYRGKLADGREVAVKRGETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDRNNVDKGSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESDHDYRPIKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKSDENGGTPVSVVDFAVPVIIAGELAKILDPRVEPPQLNETEAVELVAYTAIHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTISIVSD 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01210 796 MobiDBLite consensus disorder prediction 423 470 - -
Pste8g01210 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Pste8g01210 796 MobiDBLite consensus disorder prediction 354 370 - -
Pste8g01210 796 MobiDBLite consensus disorder prediction 423 450 - -
Pste8g01210 796 FunFam Serine/threonine-protein kinase-like protein CCR4 568 789 - -
Pste8g01210 796 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 192 782 IPR044815 GO:0004674
Pste8g01210 796 ProSiteProfiles Protein kinase domain profile. 487 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01210 796 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Pste8g01210 796 SMART serkin_6 487 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01210 796 MobiDBLite consensus disorder prediction 354 373 - -
Pste8g01210 796 Gene3D Phosphorylase Kinase; domain 1 448 567 - -
Pste8g01210 796 Gene3D Transferase(Phosphotransferase) domain 1 568 785 - -
Pste8g01210 796 FunFam serine/threonine-protein kinase-like protein CCR1 456 567 - -
Pste8g01210 796 SUPERFAMILY RCC1/BLIP-II 67 304 IPR009091 -
Pste8g01210 796 Gene3D - 27 188 IPR009091 -
Pste8g01210 796 Gene3D - 189 342 IPR009091 -
Pste8g01210 796 SUPERFAMILY Protein kinase-like (PK-like) 465 772 IPR011009 -
Pste8g01210 796 Pfam Protein kinase domain 488 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01210 Pste-Chr8 6415936 6418326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01210 12 796 Receptor kinase-like Gene Family AT3G55950 60.907 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pste8g01210 Pkinase 2.7e-44 CL0016