Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01208 GACCACTTCTCTTCTCTCCTGAGTTTCAGTCAGTCTTCGGAAGGGTGTTGTGAATTTGTGTCTTCTTGTGAATAAGAAGTCTATGGTTCTGAACTCACGATCCACACGCAACCATACAATTGAGTGAAGGCGAAGTTTATGTTTAAAGGTTCTCTTTCTGTTGGTTTCACTTGTCCCTATCTTTATGTTATGTTCCTTTTATGGATCTGTTGACTTGTCATGAGGAGAAAAAGCACCTACTCCTTACTAAACAATTCTTCTTCTTCTTCTTTCTGTAATTTGTGTGCTTATCCTTGTTTGTTTTCACTCTCAGAGAGATAGGAATTAGCTGTGACTTGTGAAAAAACAGAAAGCGCTTGTTTTCAAGTAAAGGAATCTTCAGCTGCCATGTTCCATCGCCGGACCAATTCTCCTCAACCAGACCACGAAAGCAGCGAGCTTTATGCTGAATCTAAGATTAAGGAGCTAAAGAGTGCAATTGGACCCTTATCAGGACGGAGTCTGATGTATTGCACTGATGCATGTTTTAAGAGATATTTGGAAGCCCGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTCCGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGAACACTACTTCAATGGAGAATCAGATGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAACCTTCCGCCGGATCAAGAACAGATGGCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAATAATGTGCCCCTTAAATCTGCCAGAGAGACCATCAACATTTTGCAGAACCATTACCCGGAGAGGCTCGGCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGATAACAAAACATTTCAGAAGGTGAAGTTTGTCTACCCAAAAAATAAAGACAGTGTGGAGCTCATGAAGTCCTATTTTGATGAGGAAAACCTTCCCAAAGAACTAGGTGGAAAAAGCACAATGACTTATAACCATGAGGAGTTCTCAAAATTAATGGTTCACGACGAGTTGAAATATGCAGCATTTTGGGGATCTGACGAGAAGCTATCAAACCTCATTGCTAACGGACATTCTGCAGCGGTTTACAATGAAACCCCACCTGAGGCACGTTAAGCTATGTTTAGATTACCCTTTGAGTTAAAAATAATTTTGGAAGGGTTAGAATGGTAATCCAAGCATATACTTAGTTTTAGTGTAGAAGATGCTAATACTAATCATTAAAGACATCAGCTCCGGGCACATTATGACTAAGGGGTGAATCCCCTGTTTAATTGATTACTGCTAAGA 1344 0.4085 MFHRRTNSPQPDHESSELYAESKIKELKSAIGPLSGRSLMYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWNTTSMENQMRHLVYLLENAMLNLPPDQEQMAWLIDFTGWSITNNVPLKSARETINILQNHYPERLGIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSTMTYNHEEFSKLMVHDELKYAAFWGSDEKLSNLIANGHSAAVYNETPPEAR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01208 260 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 213 IPR001251 -
Pste8g01208 260 PANTHER GH16843P 7 83 - -
Pste8g01208 260 SMART sec14_4 64 210 IPR001251 -
Pste8g01208 260 Pfam CRAL/TRIO, N-terminal domain 28 67 IPR011074 -
Pste8g01208 260 SUPERFAMILY CRAL/TRIO N-terminal domain 21 83 IPR036273 -
Pste8g01208 260 CDD SEC14 83 208 IPR001251 -
Pste8g01208 260 Gene3D - 81 238 IPR036865 -
Pste8g01208 260 Gene3D - 5 80 IPR036865 -
Pste8g01208 260 SMART CRAL_TRIO_N_2 43 68 IPR011074 -
Pste8g01208 260 Pfam CRAL/TRIO domain 83 207 IPR001251 -
Pste8g01208 260 SUPERFAMILY CRAL/TRIO domain 81 224 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01208 Pste-Chr8 6399342 6401500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01208 115 202 Acyl Lipid Metabolism Gene Families AT1G55840 32.222 4.97e-06 45.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01208 8 6399342 6401500 Pste8g01208 8 6399342 6401500 ECH