Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01203 GTTTTACACAGAAACAAAGAGAGAGAAAAACACGCAGAATAATCTTCCTATTCCCTCATTCTCTCTCTTGCCACCATCACCAGAGCATGCACATCATAAACCATGCGTTTTATTACTCTTTTGTCCCTTCCGTGTTTCTTAATTCACATGTCACTGCCCTTCTCAGTCAGCAACAAAAACAACAACGTTTCTGAGTTGGTCGTGTCGCGTCCATGGCTGTGTCCAACGGCGTTGAAGCAGTGTTAGATTTTCTGCGCAAGAATGGCTTGTCGGAAGCCGAGTCCGCGCTCCGAGAAGACATCATCCACAACACTGACCTCGGAACCTTTGACTACGAGAAGTTCTTGTTCCCCATGGTCCCGCCGCCGCCTCCGGTCAGAGTCCGATCCTTCTCCCGTCCCTCCGACCTCACCGCCTCCAAATCCAGCTCCGACGAGTTCGTCAGCATCGGTTCTTCCACTTCCCGTGTTTCTTCTTCAGAATTCATAAATCCATATGGAATCCGTTCCTCGTCCCAGACTCAGAATGATTCTGAATCTTCATCTGAAAGATTATCTCAGTTTGGCACTGCACGTGATTATCACGATTTTGATATGCAAAATGAACCGTATTGGTATAATGAAAAGGATGATGACTATTTCATGACTCCTAATTTTGAAGGGCCTGATTTCTTTACGTGTCAAAGTGAAGATAAGTTTGTCATGACTGCAGAAACGGATAATCAACATTACAATTCTCTAGACCTTGGTTACAATTACGAACAATTTCAATTAGAGAAAAATACTAATGGTGGTTTCATGGACAAGGCATGCCTTTATAATCGTTCCTCTGTGCAGGATAGAATTGTGACTCATTTAAAAGGGTATTGTCATGGTGATAAGAAAGACCAATTTGAAGGGGAATTAGAGGGAAACGCTGAGAAACACACTGTTGCCTGTAATTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGCAGTTTGGATCCTACAAACTTTGGCTACCCTAATTTGAAGGAAATCCATCTGAATGATTTTCAGTTGAAGGTTGATGCGGACATTAACTCTTTTGATTCTACTTCAGAGCTAACTGTGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAATAAGGAGTACAATGGTCCCTATGACTTAACTATCAAAGTTACTGAAAAAGATCTACCAAATGGACTTGACACCTATAAAACACAAGATGGTGGAGAATTAGCTGAAGAGCGTCAAGATCCAGAAATTGCTGCAGATGGAGAGGATACCACTGATGATGAGCTCTCAAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAGTTATACATAGAAAAAACAGGACTGGATTTGAAGAAAACAAGGAGCTGCCTATTATGCTAAATACAGTCTTGGCTGGCAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCTTTCAGTAGGGTTGTTCAAGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGACCCAGCAGATAAACACCACATTTTACGCCTTTATGACTACTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTTTGCGAGCAAACTTATACGAATTTCAGAAGTTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTGAACAGATTGCAGCTCATTACTCGTCAATGTTTGGAAGCATTGCAATACTTGCATGGCTTGGGAATTGTTCATTGTGACCTGAAGCCCGAAAACATTCTCATCAAAAGTTACAGAAGATGCGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTCCAAACAGACAATCTGTGCCTATACGTACAATCTCGATCCTATAGAGCTCCTGAAGTGATGTTAGGTCTTCAATATGATGAAAAGATTGACATATGGTCTCTCGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTTCTGTTTCCAAATGATGCAGTTGTGATGATTCTGGCTCGGATGATTGGAATGCTTGGTTCTATTGATATGGAGATGTTGGTCAAAGGGCAAGAAACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGAATGATCAACTGGAGTACATAATTCCAGAAGAGTCATCATTGGAGCAGCACCTACAGGTTGCTGATATTATGTTTATCGACTTTGTGAGATACTTACTTGGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAAGCGCTAAGCCATCCATGGCTTTCCTATGTTTACTAATCCTAAATAACGTCCTTTCTCTAGTGAAAAGTTCGGGAATTCTGTTGAAGTTACCCACCTCGGTCATGGTCTCTTGAGTTTATTTTCGGTACATAGCAAAGCTTGCAAACACAGTTTTGGTTTGTTTATGAGCTACACCAAGTCAATCCACTGTCTCATGCTGTATATTTTTTTTGCCTGTTGATTTATAGTTTGTTCTTTGTACAGAATTTCTTCCAATTATTTTTTGCCTTCCATGAATTGGGAGGTTACCCAAATAACATTTTTATGTCAC 2631 0.4021 MAVSNGVEAVLDFLRKNGLSEAESALREDIIHNTDLGTFDYEKFLFPMVPPPPPVRVRSFSRPSDLTASKSSSDEFVSIGSSTSRVSSSEFINPYGIRSSSQTQNDSESSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPNFEGPDFFTCQSEDKFVMTAETDNQHYNSLDLGYNYEQFQLEKNTNGGFMDKACLYNRSSVQDRIVTHLKGYCHGDKKDQFEGELEGNAEKHTVACNCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNDFQLKVDADINSFDSTSELTVNQSFDYYTKNDSNKEYNGPYDLTIKVTEKDLPNGLDTYKTQDGGELAEERQDPEIAADGEDTTDDELSKYTQEEEYEVFDLRVIHRKNRTGFEENKELPIMLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHGLGIVHCDLKPENILIKSYRRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGSIDMEMLVKGQETHKYFTKEYDIYYVNEENDQLEYIIPEESSLEQHLQVADIMFIDFVRYLLGINPKRRPTARQALSHPWLSYVY 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01203 714 MobiDBLite consensus disorder prediction 95 116 - -
Pste8g01203 714 PANTHER DUAL SPECIFICITY PROTEIN KINASE 103 710 - -
Pste8g01203 714 MobiDBLite consensus disorder prediction 331 365 - -
Pste8g01203 714 SMART serkin_6 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01203 714 Gene3D Phosphorylase Kinase; domain 1 403 489 - -
Pste8g01203 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Pste8g01203 714 Gene3D Transferase(Phosphotransferase) domain 1 462 710 - -
Pste8g01203 714 FunFam Putative serine/threonine-protein kinase dyrk2 402 489 - -
Pste8g01203 714 Pfam Protein kinase domain 410 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01203 714 ProSiteProfiles Protein kinase domain profile. 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01203 714 FunFam Serine/threonine-protein kinase ppk15 487 711 - -
Pste8g01203 714 MobiDBLite consensus disorder prediction 340 364 - -
Pste8g01203 714 CDD PKc_DYRK_like 408 710 - -
Pste8g01203 714 SUPERFAMILY Protein kinase-like (PK-like) 398 711 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01203 Pste-Chr8 6362219 6367056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01203 405 706 MAP Kinase Gene Family AT5G19010 31.366 2.20e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pste8g01203 Pkinase 2.8e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01203 8 6362219 6367056 Pste8g01203 8 6362219 6367056 ECH