Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01171 TTAATGTGCTTGAAAGTTTTAAGCCCAACCCAAGCCCGTGGCGACCTAAACCCTAGCTTTATAAAATGGTTAGGGTTTGTTTGTGCATCTTTCTCCATTTAGTGTGTTGCAGAGCTGCTGAGACTCTCTTACGGCATCTGTGTGTAGTTCTTTGGTTGCACACCTCACTCAACACTATGGCGGATAAGGCTGTGACGATCCGAACCAGAAAGTTTATGACCAACAGGCTTCTTTCCAGGAAGCAGTTTGTTGTAGATGTTCTTCATCCCGGGAGGGCAAATGTTTCCAAGGCTGAACTCAAGGAGAAGTTGGCCAGAATGTATGAAGTGAAAGACCCTAATACTGTCTTTGTCTTCAAATTCCGAACACATTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATATATGATACAGTGGACAATGCCAAGAAATACGAGCCCAAGTACAGGCTCATTAGGAATGGTCTTGACACGAAGGTAGAAAAGTCAAGAAAGCAAATGAAGGAGAGGAAGAACAGAGCTAAGAAGATTCGTGGAGTAAAGAAGACCAAGGCTTCTGATGCCGCCAAGGCTGGAAAAAAGAAATGAGTTTTGAGACGCCGTGTTTCGATTCTATGGTTATATTGGTGTCGTTGCTTTGTAATAGTTATTTTATCTTATGCTAGAATTATAGAATGAGATGTTTTGGTGTTGATCCCTGTTTTATTTTATGTTTACTTATAACTTAATGTTGAGTACTCGTGTTGAACAATTTTGAGAACTCATGTTTTACCTTGTTTAACTTTCAACTACTTAGTAGATTCGATACGGGGAGTTAGTTGGTAGATATACCACTAATGTGCAATGGGATGTAAGTGTTTTTATCAATTCGAATTATGTAGTTCTGCATACGGGGCTAATTTGCATTTCCGTATATCCGGTATTATTTATTGAAAAATAAGAAATACAAAATTATGCCACATTAGGTGGCAATGAATGTTGAACCCCA 990 0.3939 MVRVCLCIFLHLVCCRAAETLLRHLCVVLWLHTSLNTMADKAVTIRTRKFMTNRLLSRKQFVVDVLHPGRANVSKAELKEKLARMYEVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVDNAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01171 174 PANTHER 40S RIBOSOMAL PROTEIN S24 38 168 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pste8g01171 174 Gene3D - 35 169 - -
Pste8g01171 174 FunFam 40S ribosomal protein S24 38 174 - -
Pste8g01171 174 ProSitePatterns Ribosomal protein S24e signature. 103 125 IPR018098 -
Pste8g01171 174 Pfam Ribosomal protein S24e 62 140 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pste8g01171 174 Hamap 30S ribosomal protein S24e [rps24e]. 41 143 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pste8g01171 174 MobiDBLite consensus disorder prediction 139 174 - -
Pste8g01171 174 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 43 145 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01171 Pste-Chr8 6173046 6175087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01171 38 169 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.879 1.16e-84 243