Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01169 AAAGAAGTCACTACTATTACATACAATGACCACAGCAGAACAGATATAAGTGCCATATTCTCTTCGTTTCCAAACAATGTTGTTGCATCGGATATTACTTTTAAGAACTCGTTCGATATTGCAACAATGTTAAATTTGCCATTAATTCGGGGGGAAAGTAACAGGCAACAAGTTCCAGCATTGGCTGCAAGATTATATAGAGACAAAATTTTCATTGGTTTTCCAGATACATTGTGGGATGTGGAAGGACGTGACTATTTCAAAAAATGCCTTATTGAAGGTGCAGTGGTCTTCATATTTGGTTATGGACAATCCTATTTAGAGGATTGTGTGCTTAACGCGACTTCCTCGGGTGCAATAACAGCACACGGACGTAGTTCAAATAGAGACCCAAGTGGCTTTGTGTTCAAAAGAGGCTTTGTCGTTGGTACTGGGAGCACTATATTAGGCAGAGCCTATGGTCCTTGTTCGAGAGTTATATTTTATAAGACAAACTTGGATTCTGAATTGTATTTCCTACGCCGAGATTGTGTGCACAGGGAAAGATGCCAATACCTCCAAACGTGTTCCTTGGATGAAGAAGTTGTCAGATTT 594 0.3973 KEVTTITYNDHSRTDISAIFSSFPNNVVASDITFKNSFDIATMLNLPLIRGESNRQQVPALAARLYRDKIFIGFPDTLWDVEGRDYFKKCLIEGAVVFIFGYGQSYLEDCVLNATSSGAITAHGRSSNRDPSGFVFKRGFVVGTGSTILGRAYGPCSRVIFYKTNLDSELYFLRRDCVHRERCQYLQTCSLDEEVVRF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01169 198 Pfam Pectinesterase 8 168 IPR000070 GO:0030599|GO:0042545
Pste8g01169 198 Gene3D - 1 173 IPR012334 -
Pste8g01169 198 SUPERFAMILY Pectin lyase-like 3 170 IPR011050 -
Pste8g01169 198 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01169 Pste-Chr8 6154569 6155939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01169 2 177 Carbohydrate Esterase AT2G19150 40.526 5.81e-38 130