Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01163 ATGAATCATGTTGTGTTTCTCTTCACACTAACCATTTCTCTTCTTTCTTTAAATGTCAAGGCACAGCAGAATTACTCAGGGAATTCAATACTAAGTTGCAAGAACGATGACAAAATGGGGCCTTCACCTTCCTTCCTATACACCTGCAATGGCCTCAATAAATCGTGCAAGGCCTTCCTCATCTTCAAATCCAAACCTCCTTTCAACTCCATACCCACAATTGCCAACCTCACATCATCAAATCCTGAAGAGCTAGCAAGAATCAATGATGTCACTCTGCTCAAAGTTTTCCAAACTGGGAAAGAGGTGATTGTCCCTGTAAACTGTTCTTGTTTAACTAGGGACTATTACCAAGCTGAAACCAAATGCATATTGGGGCCATCCCCAACATATTTTAGAGTGGCAAATAATACTTTTCAGGGTTTGACCACATGTGATTCCCTTAAGGGTGCTAATCCGTATGGAGAATTTGATTTGCTTCCTGGCATGAAATTGCATGTGCCACTCAGATGTGCTTGTCCAACATGGCATCAGATCACAAGCCGCACCAAGTATTTACTGACATACTCAGTGAACTGGGGTGATGACATTACAAATATTGCTACAAGGTTCAACGTAGCAGCAGGTAATGTGGTTAATGCCAATGGTTTTTACACACAAACACAGACTATTTATCCATTCACAACTATTCTGATTCCATTGCCCAGTGAACCTGTGAGTTCAATGACCACGGTTGCTAGTGATCCACCAACCATGTCACCTCTTCCTGTTTACAGCTCCAAAAATTGCAACTCAAAGACGAAACTCTATACTGCTATTGCCAGCACAGGGGGTTCCATGGTGATTCTATGTTTTGTCTTATATGGGGTTTTTCTGTTCAGAAGGAGATCATCAAGGTTCGTTAAGAGAGGTGAAGAAGACGAGAGAACAAAGCAGTTGTCTTCAGACGATATCCGGGGGGAGATAGCAATCATGGAACATCACTCTAAAGTGTACGAGTTTGAGGAGATAAAGAAGGCCACTGAAAATTTTAGTTCAAAGAATAAAATTAAAGGTTGTGTGTTTCGTGGGGTATTTGGTAATGACAAAAACATATTGGTTGTCAAAAAAATGAGAGGAGATGCATCGAAGGAAGTGAATTTGCTGAAGAGGATTAATCATTTCAACCTTATAAAGCTGCACGGTTACTGTGAAAACGATGGTTGCCCCTACCTAGTTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTTAGCAAAAACAGGTCCACGGAGCACCAGTGTTTGGCAAGGAGGATCCTGATTGCTTTGGATATTGCCAATGGTCTTCAGTATCTCCACAACTTCACAGAACCTTGTTATGTGCACAAGAACATAAATAGTGGAAACATTCTACTAAACAAAGATCTAAGGGCCAAGATAGCAAATTTTGCCCTTGCTGAAGAATCAGAAAGCAAAATAAATTATGGTTGTGCCTCATCTCATGTCACAACATCGATGGGTTACATGGCTCCAGAGTATCTGGAAGCTGGGATAGTCACTACCAAAATGGATGTCTATGCCTTCGGAGTGGTGCTGTTGGAATTGATCACGGGTAAAGATTCTGTTACCCTACAAGATGGGAGAGAAGTAATGCTTCATGCAATAATAGTAATTCTCATCGGTGAAGAGAATGAAGAAGAGAAGGTAAGTTTATTCTTTGATCCTAGCCTCAGTGGGAACAATGAGAAAGTATGTGCTCTCCAGCTAGTCAAACTAGGCCTGACCTGCTTGATTCAAGAACCAGCCGAGAGACCAACCATGCTAGAGGTAGTCTCTAGCTTATTGAAAATATATACAAGTTATATGGAAAAAAGAATACCACCTACCATCAACTACAGTCCCGACCTGGAGAGGTGA 1902 0.4122 MNHVVFLFTLTISLLSLNVKAQQNYSGNSILSCKNDDKMGPSPSFLYTCNGLNKSCKAFLIFKSKPPFNSIPTIANLTSSNPEELARINDVTLLKVFQTGKEVIVPVNCSCLTRDYYQAETKCILGPSPTYFRVANNTFQGLTTCDSLKGANPYGEFDLLPGMKLHVPLRCACPTWHQITSRTKYLLTYSVNWGDDITNIATRFNVAAGNVVNANGFYTQTQTIYPFTTILIPLPSEPVSSMTTVASDPPTMSPLPVYSSKNCNSKTKLYTAIASTGGSMVILCFVLYGVFLFRRRSSRFVKRGEEDERTKQLSSDDIRGEIAIMEHHSKVYEFEEIKKATENFSSKNKIKGCVFRGVFGNDKNILVVKKMRGDASKEVNLLKRINHFNLIKLHGYCENDGCPYLVYEYMENGSLREWLSKNRSTEHQCLARRILIALDIANGLQYLHNFTEPCYVHKNINSGNILLNKDLRAKIANFALAEESESKINYGCASSHVTTSMGYMAPEYLEAGIVTTKMDVYAFGVVLLELITGKDSVTLQDGREVMLHAIIVILIGEENEEEKVSLFFDPSLSGNNEKVCALQLVKLGLTCLIQEPAERPTMLEVVSSLLKIYTSYMEKRIPPTINYSPDLER 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01163 633 Pfam Protein tyrosine and serine/threonine kinase 373 609 IPR001245 GO:0004672|GO:0006468
Pste8g01163 633 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Pste8g01163 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 616 - -
Pste8g01163 633 Gene3D LysM domain 177 245 IPR036779 -
Pste8g01163 633 Pfam LysM domain 189 233 IPR018392 -
Pste8g01163 633 SUPERFAMILY Protein kinase-like (PK-like) 322 609 IPR011009 -
Pste8g01163 633 FunFam PTI1-like tyrosine-protein kinase 3 410 621 - -
Pste8g01163 633 ProSiteProfiles Protein kinase domain profile. 295 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01163 633 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Pste8g01163 633 Gene3D Transferase(Phosphotransferase) domain 1 410 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01163 Pste-Chr8 6096300 6098201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01163 10 612 Receptor kinase-like Gene Family AT2G23770 36.465 2.20e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste8g01163 PK_Tyr_Ser-Thr 1.2e-38 CL0016