Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01156 ATGGCAAGTTCTGTGCGTGTGAAAGAAGCATCGGTGGTCACACCTTCGGAGCCCACTCCGTCAAATGTACTGGCTCTATCAGCTCTTGATTCACAACTCTTCCTTCGTTTCACCATAGAGTACCTCCTGGTCTACAAGCCATGCCCTGGGTTGGACCAAGCTGCCACCGCGGCCCGTTTGAAAGCAGCATTAGCACGAGCACTGGTTCCCTATTACCCCTTCGCGGGCCGAGTCAGGCCCAGGCTCGATGGGCCAGGACTCGAGGTGGTGTGCGCAGCCCAGGGTGCCGTGTTCATAGAAGCCTCCGCTGACCGTTGCAACGCCGGCGACTTCGAGAAAGCGCCCAAAACAGTTACACACTGGAGGAGACTGCTGTCGCTCCACGTGGCAGACGTTCTGAAGGGATCGCCCCCGCTCGTTGTTCAGTTGACGTGGCTCGCCGACGGAGCCGCCGCAATCGGGGTCGGAATAAACCACTGCATCTGCGACGGGATCGGGAGCGCGGAGTTTCTAAACCACTTCGCCGAGTTGGCGAGCGAAAAACAGGAGTTGTCGAAACATGTAGAGCCAGTCTGGGAGCGTCACCTTATGAACCCGGTGCGTGGGATGAACACGGGGGTTGACCCGGCGAGTCACCCGGAGTTCAAACGAGTTCCGGATTTATGCGAATTCATGAACAGGGTATCGAGCGGGCTAAAACCGACGTCGGTGACCTTCGACAAGAGGCGGCTGAACGAGCTGAAGCGACTGGCTGGGGGGAGGAGTGAGGGTTACACGTCGTTCGAGGTGCTTGCGGCACACGTGTGGAGAAGCTGGGCGCGGGCTATAAAATTTCCGCCGAAGCAGAAACTGAAGCTGGTGTTCAGTATAAACGTACGGAATCGTATGAAACCGGGATTGCCGGAGGGGTATTATGGGAACGCGTTTGTGTTGGGGTGTGCGGAGACGAGTGCGAAGGAGTTGGAAGAAAGAGGAATAGAGTTCGGGTCGGGTCTGGTGAAGCGTGCGAAGGAGAGGGTTGGGAGCGAGCACGTGAGGGGCGTGATGGAATGGGTGTGGGAGAAGAAAGCGAGTCCGGACCTTGTTGGGGTGCTCATAGTGTCCCAGTGGTCGAGGCTTGGTTTGGAGAAGATTGACGTCGGTATGGGAAAGCCTGTTCACGTGGGACCCGTCTGCTGTGATAGGTACTGTTTGTTTTTGCCCGTCAGGGATCACTTTGTGAGTGTCAAGGTCATGCTCGCTGTCCCCACTTCTGCCGTTGACAATTACCACCTTTTCATGCGTTCCTCCCACCTGTGA 1299 0.5689 MASSVRVKEASVVTPSEPTPSNVLALSALDSQLFLRFTIEYLLVYKPCPGLDQAATAARLKAALARALVPYYPFAGRVRPRLDGPGLEVVCAAQGAVFIEASADRCNAGDFEKAPKTVTHWRRLLSLHVADVLKGSPPLVVQLTWLADGAAAIGVGINHCICDGIGSAEFLNHFAELASEKQELSKHVEPVWERHLMNPVRGMNTGVDPASHPEFKRVPDLCEFMNRVSSGLKPTSVTFDKRRLNELKRLAGGRSEGYTSFEVLAAHVWRSWARAIKFPPKQKLKLVFSINVRNRMKPGLPEGYYGNAFVLGCAETSAKELEERGIEFGSGLVKRAKERVGSEHVRGVMEWVWEKKASPDLVGVLIVSQWSRLGLEKIDVGMGKPVHVGPVCCDRYCLFLPVRDHFVSVKVMLAVPTSAVDNYHLFMRSSHL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01156 432 PANTHER ACYL TRANSFERASE 4 4 425 - -
Pste8g01156 432 Gene3D - 1 216 IPR023213 -
Pste8g01156 432 Gene3D - 225 424 IPR023213 -
Pste8g01156 432 Pfam Transferase family 4 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01156 Pste-Chr8 6060749 6062047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01156 5 427 Monolignol Biosynthesis Gene Families AT5G48930 25.850 2.29e-43 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01156 8 6060749 6062047 Pste8g01156 8 6060749 6062047 ECH
Pste8g01156 8 6060749 6062047 Pste8g01156 8 6060749 6062047 PCT