Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01149 CATACAATACATACCATCATTAAAATTTACGTAAATGATACTGCCATGGCTTCCACAACTTTCTCCTTCAGTGTCGTCGCTCTTACTGTCTCACTTTTCATGTTAAACTCCGCCACGGCCTCTAATGTCTCCGCTATCTTCGGCTTCGGCGATTCCACGGTGGATTCCGGCAACAACAACCGGTTGAACACTCTCTTCCGCGGCGACCACTTTCCTTACGGACGCGACTTTCCCGGTCACGTCCCAAATGGGAGGTTCTCGAACGGGAAAATAGCGACCGATTACCTAGCCCAAACTCTAGGCATAAAGGAGCTTTTACCCGCGTATCTTGACCAGCATTTGACCGATAATGATTTGGTCTCTGGCGTTAGTTTTGCCTCTGGGGGCTCTGGTTTGGATCCTAACACTGTGGCATTGGCCAGGGTTTTCGACTTGTCCTCACAACTTGCCATGTTTGAAGAGGCTTTGCAGAGGATCAAGAGACTTGTTGGAGATCAAAAGGCCATGGATATAGTTCAAAATTCCTTGTTTGTTATCAGTATTGGGACCAACGATATGCTCTACAATGCCTATTTGTCACCACCAAGGATGATTCCCTATGGTTCTATTTCAGGCTACCAACATTTTCTGCTGCAAAATCTCCATGCTTTTATTCAGAGGCTGTATGGAGCTGGAGGACGTCGGATTTTGGTGGCAGGTCTTCCACCAATTGGGTGTCTGCCAGTGGAAATAACAGTAAGCAGTGTGATACCTAGCCCACACTGGCTCCAACGAGTGTGTAACGTGCAACAGAACAACGATTCTGAAGCCTACAACAAGAAGCTTCAATCCCATATCCATTTACTCCAATCCTCACTAAATGCAGCTAAAATCGCTTATTTCGATACCTACACGCCCATTCTCGATATGGTCATAAACCCAGCCAAATATGGGTTTGCACAAACGGTAAAAGGATGCTGTGGGACAGGGATGTTGGAGATGGGTCCGGTGTGCAATGCACTTGACCGAACATGCCCCGATTCGTCTAAGTATGTATTCTGGGATGCTGTGCACCTTACACAAGCTGCAAACTACGTTCTTGCTCAGACTGCTCCACAAAATGTTCTTCCATACCTTACTAATTAA 1125 0.4649 HTIHTIIKIYVNDTAMASTTFSFSVVALTVSLFMLNSATASNVSAIFGFGDSTVDSGNNNRLNTLFRGDHFPYGRDFPGHVPNGRFSNGKIATDYLAQTLGIKELLPAYLDQHLTDNDLVSGVSFASGGSGLDPNTVALARVFDLSSQLAMFEEALQRIKRLVGDQKAMDIVQNSLFVISIGTNDMLYNAYLSPPRMIPYGSISGYQHFLLQNLHAFIQRLYGAGGRRILVAGLPPIGCLPVEITVSSVIPSPHWLQRVCNVQQNNDSEAYNKKLQSHIHLLQSSLNAAKIAYFDTYTPILDMVINPAKYGFAQTVKGCCGTGMLEMGPVCNALDRTCPDSSKYVFWDAVHLTQAANYVLAQTAPQNVLPYLTN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01149 374 Pfam GDSL-like Lipase/Acylhydrolase 46 362 IPR001087 GO:0016788
Pste8g01149 374 CDD SGNH_plant_lipase_like 45 362 IPR035669 -
Pste8g01149 374 SUPERFAMILY SGNH hydrolase 46 366 - -
Pste8g01149 374 Gene3D SGNH hydrolase 33 368 IPR036514 -
Pste8g01149 374 PANTHER GDSL ESTERASE/LIPASE EXL3 30 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01149 Pste-Chr8 6017320 6019086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01149 25 368 Pollen Coat Proteome AT1G75910 33.429 1.20e-60 197