Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01144 ATGAAGATAACAAAAATCAAACGCAGTCTTCTCCGCGGCAGCGGCAGCCTCCGCTCCAGGGAGCCAGCAGCCGCCGCAATAGACAGCGCAACGACGCCGGCTATCAAGCATAAAGCAGTGGATACCCATCTTGAGCCGCCACAGGACGGTAAAGCAATGCCTCTCAGACCTGTTGAGGTCAAGAAGCTCAGTGGCAATGCGCTCGATCTTCTGCCCACGCGCTCCGTGGAGAGAGCGCGTGAGGCTCAGAAGCGAGGCATTGTTCTTTTGCTTCACAACAGCAAGCCTCTTGCGGGCGAGGGCTTTGGGGAAGGAGGCTGCGGCGACTTTGACGGCGCAAAGGAGGACGACGGCGCGGCGGAGGAATCGGCGAAGATCGCACTTCGAGCTGGGCGACAGCGAACGCGCTTTCAAGTCTCTTGGGTCCATTCACCAATCTCACTTCACGTGTCACAACATCTTAGAACCAGTCCATGGTTATGCTTTAGTTTAGACATCACTCTTTTGTTCCATATCGCTCTCTCCAAGCTTGTGAAAAAGACCGTGTTCTTGCTGCAACAATGGGCAAGAAAGGAAACTCAATCGGTTCAAGGATCTTTGTGGAGCATTAAGCTTTTTGGTAAGGCTCTTTTGAAGTTGAACCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGATTGATGATGAAGTTTCTGTTGATCCTTGTAATTGGTTTGGAGTTCAGTGCTCGGATGGAAGAGTTGTGGTCTTGAATTTGAAGGATCTATGCCTTGAAGGAACTTTGGCGCCTGAGCTAGTGAAACTTGTCCACATAAAGTCCATTATCTTGCGGAACAACTCTTTCTCTGGGACCATCCTTGAAGGATTTGTAGAGCTAAAAGAATTAGAGGTTTTGGATTTGGGATACAAAAATTTCAGTGGGCATCTACCAGATGATCTCGGGAGTAATATTTCACTAGCAATCCTTTTGTTGGATAACAATGAATTTCTTGTTGGTTTCTCTCCTGAAATCAATGAACTGAAGATGGTTTCTGAATCTCAAGTAGATGAAAATCAGTTAACTAATGCTGCTAAAATGCCAGCTTGTACAGAAAGAGTCACCACATGGCATATTGGTCGTGGCCTACAACAAAAGGCTACACCGCCGCCTATACCACGAAACTCTTCTTATTATCGCGGTAGTCCACTTCAAATGAGCTCTTCTCCTCCTTCTGCTCCTCCACCAGTGCCAGAGCTAGCTCCTTCTACGAAAAATGCTTCTGATTCTCCTCTTCCCCATTCTACACCTGATTCTGCGGCACTACCTAAAACTGAAAGCACCCCCCATTCTACACCTGATTCTGAAGCACTACCTAAAGCTGAAAGCACCCAATCAAATAAAAATATTCTTCATATTGTGGCTGGAGTAATAGGTGGTGTTGTGTTTCTTGTTTTTTCTAGCATTGGAATATGTCTTTGTAAAACCAAGGTTTCTAATGTCAGACCTTGGTCCACGGGACTAAGTGAACAGCTTCAGAAGGCGTTTGTAACCGGCGTACAAAAGCTAAGGAGATCAAATCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCTCCCATTGGAACACTGTACAAAGGAACTTTGTCTAGTGGCCTTGAAATAGTTGTAGCATCTGTTTCGGTGACATCATCCAAGAATTGGTCAAAGACTCTAGAAACACAATTTAGAAGCAAGATAGAAACACTATCGAAAGTAAACCACAAGAATTTTGTCAATCTTATTGGATACTGTGAAGAAGAGAAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCGCCAAACGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGATAACAAGACTTAGAGTTGCAACGGGCATGGCTTATTGCCTGCAACATATGCACCAGTTGGACCCTCCTTTGGCCCTTATCAAGCTGAATTCTTCAGCTGTTTACCTGACTGATGACTATGCTGCCAAACTCTCAGATTTGAGTTTCTCGAATGACATAGCCTCTGCTGAAACAAGAGCTACTGACATGCCCATAGCAAGTCCAGAAAGTAATGTTTATAGCTTTGGTGTTTTGTTATTTGAAATGGTCACTGGTCGCCTCCCTTATTCAGTGGAACAAACTGACTCACTTGAAAACTGGGCATCACACTATTTACAAGGGGATCAGCCTCTCAAAGAAATGGTGGATCCAATTCTAGTATCTTACCAACAAGATCAACTGGAACAAGTTGCTGCATTGATTACATCTTGTGTCCACCCTGATCCAGAGCAGAGACCGACAATGAAAGATGTCAGTGAGAGACTAAAAGGCATAACAAAGATAACACCCGAATCAGCAGTTCCAAAACTTTATCCACTTTGGTGGGCAGAACTTGAGATTGCTTCTGCAGAAGCACGCTGAAACCAGTGAAGCAGATTGTAATTATTAAGCCTGAGAGCTTCTAGCATTGTGATCCTTTTTCCTTAGGTGAAGTCATAAAAAAGTTCTTATTTAAAGTATCTATTGTTGTAGGACATGGTCCCAAATGACGTGTGGGAGACCAAAAAGGTGTGGTTAAGTTCTTTTAGGTGCTCCTTTTAATTGTAGCTCATGAAATTGCACCTAGAAAAAAGCTTTTGTATATCAGTTATTTCAAGTCAGTTTATGTGGTTGATCAAGATATGTCGGATGTACAACTCGTCTCATTCCCTTCAGATGCGCCGAACATACTGGTAGTTTAATAATCATATTCACAGTTCTTGTC 2794 0.4359 MKITKIKRSLLRGSGSLRSREPAAAAIDSATTPAIKHKAVDTHLEPPQDGKAMPLRPVEVKKLSGNALDLLPTRSVERAREAQKRGIVLLLHNSKPLAGEGFGEGGCGDFDGAKEDDGAAEESAKIALRAGRQRTRFQVSWVHSPISLHVSQHLRTSPWLCFSLDITLLFHIALSKLVKKTVFLLQQWARKETQSVQGSLWSIKLFGKALLKLNQRIVSDPFGALSNWIDDEVSVDPCNWFGVQCSDGRVVVLNLKDLCLEGTLAPELVKLVHIKSIILRNNSFSGTILEGFVELKELEVLDLGYKNFSGHLPDDLGSNISLAILLLDNNEFLVGFSPEINELKMVSESQVDENQLTNAAKMPACTERVTTWHIGRGLQQKATPPPIPRNSSYYRGSPLQMSSSPPSAPPPVPELAPSTKNASDSPLPHSTPDSAALPKTESTPHSTPDSEALPKAESTQSNKNILHIVAGVIGGVVFLVFSSIGICLCKTKVSNVRPWSTGLSEQLQKAFVTGVQKLRRSNLEAACEDFSNVIGTSPIGTLYKGTLSSGLEIVVASVSVTSSKNWSKTLETQFRSKIETLSKVNHKNFVNLIGYCEEEKPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWITRLRVATGMAYCLQHMHQLDPPLALIKLNSSAVYLTDDYAAKLSDLSFSNDIASAETRATDMPIASPESNVYSFGVLLFEMVTGRLPYSVEQTDSLENWASHYLQGDQPLKEMVDPILVSYQQDQLEQVAALITSCVHPDPEQRPTMKDVSERLKGITKITPESAVPKLYPLWWAELEIASAEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01144 816 SUPERFAMILY Protein kinase-like (PK-like) 514 785 IPR011009 -
Pste8g01144 816 Pfam Leucine rich repeat N-terminal domain 208 246 IPR013210 -
Pste8g01144 816 ProSiteProfiles Protein kinase domain profile. 528 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01144 816 FunFam Inactive receptor-like serine/threonine-protein kinase 502 610 - -
Pste8g01144 816 Gene3D Phosphorylase Kinase; domain 1 496 610 - -
Pste8g01144 816 Gene3D Ribonuclease Inhibitor 207 373 IPR032675 -
Pste8g01144 816 Pfam Protein tyrosine and serine/threonine kinase 531 785 IPR001245 GO:0004672|GO:0006468
Pste8g01144 816 SUPERFAMILY L domain-like 212 347 - -
Pste8g01144 816 PANTHER PROTEIN MALE DISCOVERER 2 195 814 - -
Pste8g01144 816 Gene3D Transferase(Phosphotransferase) domain 1 611 797 - -
Pste8g01144 816 MobiDBLite consensus disorder prediction 372 459 - -
Pste8g01144 816 FunFam Leucine-rich repeat receptor-like kinase 208 333 - -
Pste8g01144 816 MobiDBLite consensus disorder prediction 418 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01144 Pste-Chr8 5994517 6005933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01144 213 788 Receptor kinase-like Gene Family AT1G68400 28.006 1.00e-40 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pste8g01144 PK_Tyr_Ser-Thr 2.9e-22 CL0016