Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01139 CGAGGTTGTTGGGAATCTTGTTGCTTCTTTTTTCTTGCTTCACCATTTTGTCTTTGATTTCACTATGAGTACTTCTCCCTCGTTCCAATTCTGCTACATTTCCCAACCCCCTTTTTCGCGATTTGGTTATTTGAACTCTGATTATTAACTTACTTTTTTTTTTTTTGCTGTAGCAATCACTTTCGAATATTGCGTGCCTTGGTTGGAATTACTTAATAAATAAAATAATAGATATTTGATTTGGGCGGCCACTTCGTTTGAATTTATTCGCACTTTCTTTCTACCGAATAATTCAATCACTCTCTCTCTACTGTTCTGTCTTCTGTGTGTGTAAGAGAGAAACGGTTAATCAGTCGTCTCTGAATAACGAAGATGAAGATGAAGACGCCATTGAAGCAGCTGAAGCTTGCGGTTCCTGCTCAGCAAACCCCATTACCTCTTTCCTTTGATGCTCATTGTTTGGGGGTTAACGAGGGAAGTTACCCAAGCACTGGGAATGGAATTGATTCAAATTGGACTGCAAGTGGAACATTCCATGATGGAGATCTACTCTTGAATCAGAAAGGTTTGCGGCTTATCTCTGAAGAAAAAGAATCACGGCCTTCGGATAGTAAGGAGCTGGAATTTGACTTCTCACTGGACGACCTTGAGACCATCAAAGTAATTGGAAAAGGAAGTGGTGGTGTGGTACAACTTGTTCGCCATAAGTGGGTTGGAAAATTATTTGCGTTAAAGGTTATACAGATGAATATACAAGAGGATATTCGAAAACAGATTGTTCAGGAACTGAAAATAAATCAAGCGTCACAGTGTCCACATGTTGTAGTTTGTTATCACTCATTCTATCACAATGGAGTTATATCTCTTGTGTTAGAATACATGGATCGTGGTTCTCTAGCAGATGTAATCAAACAAGTTAAAACAATTCTGGAACCATATCTCGCTGTGGTTTGTAAGCAGCCAGAAAGAATTAGTGGAAGTACTTATGATTATAGGAGTGACATCTGGAGTTTGGGTATGGTAGTGCTTGAGTGTGCCATAGGACGGTTTCCTTATATACAGTCCGAAGATCAGCAAAGCTGGCCAAGTTTTTATGAGCTTCTTGCAGCAATTGTGGAAAGCCCCCCACCTTCTGCTCCCCCTGATCAATTCTCCCCGGAATTCTGTTCGTTTGTGTCATCCTGCATTCAAAAGGATCCTCGGGAGAGATCAACGTCCTTGGAGCTTCTGGGTCATCCTTTCATAAAAAAGTTTGAAGACAAAGATCTAGATCTTGGGATTTTGGTAGGTAGCTTGGAGCCTCCTGTAAATTTTCCCAGATAATTCTTGGTGACAGAGCAGTGGGGAAATTTCTCGTCAGTTATGCTATATATTATGAGTTTACTGGTATGAGACTAGTTTGGTGATGACTTCATTACAGTTTTCTGAAAGCTGATATGTATAATAGTTTCTTGTTTGTATTCAAGGGCTTGACCATTTTGTTTGATGTTCTCTTTAGCTATGAAGCTGAGATGGATGCACGACACTATCACTCTCACTCATGTAAAAAATATAGAACACCGTTTTATATGTAATCAAATTAAAT 1585 0.3943 MKMKTPLKQLKLAVPAQQTPLPLSFDAHCLGVNEGSYPSTGNGIDSNWTASGTFHDGDLLLNQKGLRLISEEKESRPSDSKELEFDFSLDDLETIKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVIKQVKTILEPYLAVVCKQPERISGSTYDYRSDIWSLGMVVLECAIGRFPYIQSEDQQSWPSFYELLAAIVESPPPSAPPDQFSPEFCSFVSSCIQKDPRERSTSLELLGHPFIKKFEDKDLDLGILVGSLEPPVNFPR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01139 316 Gene3D Transferase(Phosphotransferase) domain 1 169 305 - -
Pste8g01139 316 FunFam Mitogen-activated protein kinase kinase 6 62 171 - -
Pste8g01139 316 Gene3D Phosphorylase Kinase; domain 1 61 168 - -
Pste8g01139 316 ProSiteProfiles Protein kinase domain profile. 92 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01139 316 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 49 196 - -
Pste8g01139 316 Pfam Protein kinase domain 197 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01139 316 Pfam Protein kinase domain 93 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01139 316 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Pste8g01139 316 SUPERFAMILY Protein kinase-like (PK-like) 83 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01139 Pste-Chr8 5975119 5980534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01139 1 316 MAP Kinase Kinase Gene Family AT5G56580 63.757 4.82e-161 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pste8g01139 Pkinase 2.1e-14 CL0016