Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01120 GGAAACAGACCTTATGCCCCAGACTCTTCTCTCTCTCTCTCCACAGTACTTTGATGACTCATATATCTCTCAGCTTCCATAAATAACTACTACCCCTTTTCACTTACTTTTAGTTCAAACCACCATCCCCAAAAACTCTGAATCCTTTCTCTTTCTCCTCATTTTTTTATCTGACTAGTAGTGACAAGTAGTCCCTGGAAATTAATTACTCTCTCAGCTTTAAAATTTTCCCTATGGTAGTGTTCCTTCAACCCTAGTGGGGATCCTACTAAAAGCCTATGACCTCATCAACACAAATCATAAGTCACTCATGATATAATCACAGCGTTAAACCCTTCCTTTTCACCTCTTTCAAGTCATTTCATTCTCCTCACCACTTGTTCAATTCCCTTCCAGCTATTTCTTACTATATTTGTTTTTCACATAGTATCCTCAACTCTCACCGGTCAGTCACCTCTATTAATTCCATTTCCTTTGTATTTCACTACCTGAAACAAACCTAGCTAGATCTTCTCCATGTTCGCTAATTCACACACGGTAATGCAAACCTTATTATCACCTTTGTCGGGGCCAGACCTCTCCTTGAACATAAGTCCTCCCTCTATTTCAGATTCTGAAGCCAAAGAAGTGGGTGGCTTTGGAAAAGTGCTTTACAGCGATATGTGTTCAACTTCTGATTCGGGTAGCAGTGGAGGAAGTAGTGATTTGAGCCACGAGTTCCATAACCTTGGTCATCGTCGTGAGCCCACGTTGAAGTTAGGCTTTGATACCGTGGATTTGAATCCCCATCATCATCAAGTACAAGGTGTCCCAAGAAGCTTCAATCATCACCACCTTCAACCTCACATCTATGGCCGCGATTTCAAACGAAGTGCAAGAGTCGTTAATGGTGTCAAAAGAAGCGTCAGAGCTCCAAGGATGAGATGGACCACCACCCTCCATGCTCATTTTGTTCATGCGGTTCAACTTCTTGGCGGCCATGAAAGAGCCACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGGTCATGGGCAGACAGATATTGGATTGAACCCAAGGGCAGGGGTTAATATTGTTCATCTGCATGCACCCTCACCTAATTGTGACTCACCATCCAATTTACCAGACCCGATTCAAAGTTCCCACAGGACACCGTGGCAATCATCAATAGAGACAAAAACAAACAATAGGAGACAAGAGGGGGAGATGTATTGTGAGGTGAAGGGAAATGAAGGCATGGTGGATGGGCACAATTATGGAGGCCTGTCAAATTGCATGAAGGAAGGGTTGGATTGTACCCCTTTGTCACGTACCGAGGCAATGCTTGACCTTGAATTCACCCTTGGAAGGCCCAATTGGCAAAAAGACCACGCCGAATCTTCAAGAGAGTTAACTCTTCTCAAGTGTTAAGTTTAATTAAATAAACACCACAACACAACACTCCCTTTCCTTGTCATGAAACCATACCATGTGGAGGGAAAGAGATGAGGAATTATTCCATGTGAATGATTTGATTTTATTGGTGATATATATCTTTCTTAGTCGTGTCTGGGGAGAGAGATGAGTAATGGAATGGGATAAAGGGTTTGCTACAAAACATCTGCTTCAGTCCAAACAATTTCAGGCATTGTCTTTGATGTCATTTTCGGTGCAAGGTATACAACATTATGAAAAAATTAGAATGCCTCTTTCAGGCCATGGACCATGGGTTCTAGTTAGGCTAAATAGGACCCATTTCGGAATGCTCATATTCGACAGGTGGGTCTCTTTTGTGCCAGACCATCATAACATCCTTCCATCATATCTGTACCCGAGACACTTACATAAATGCTCAGGTTAAATTTACTAATGCAAAACAAACTATTTTTCACCACCTTCCATACACCAATTAATATTCATCTTCATGTCTTTCACACACGGCTTTCAAACTTTTTCCTTTATTCACTTTTCTTCCTTCTTCCTTCTTCTATATATATCTACAATCAACTATGCTTTTATACCTTTTACTCCCATAATTCGTTGATTTTCTC 2105 0.4143 MFANSHTVMQTLLSPLSGPDLSLNISPPSISDSEAKEVGGFGKVLYSDMCSTSDSGSSGGSSDLSHEFHNLGHRREPTLKLGFDTVDLNPHHHQVQGVPRSFNHHHLQPHIYGRDFKRSARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDIGLNPRAGVNIVHLHAPSPNCDSPSNLPDPIQSSHRTPWQSSIETKTNNRRQEGEMYCEVKGNEGMVDGHNYGGLSNCMKEGLDCTPLSRTEAMLDLEFTLGRPNWQKDHAESSRELTLLKC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01120 322 FunFam Myb family transcription factor 131 189 - -
Pste8g01120 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 186 IPR006447 GO:0003677
Pste8g01120 322 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 310 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pste8g01120 322 Gene3D - 132 189 - -
Pste8g01120 322 Pfam Myb-like DNA-binding domain 134 185 IPR001005 -
Pste8g01120 322 SUPERFAMILY Homeodomain-like 130 187 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01120 Pste-Chr8 5834729 5839525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01120 17 200 G2-like Transcription Factor Family AT5G42630 59.358 1.35e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste8g01120 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01120 8 5834729 5839525 Pste8g01120 8 5834729 5839525 ECH
Pste8g01120 8 5834729 5839525 Pste2g00939 2 10054295 10060502 PCT