Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01107 CTTACCCCGCGCGCCCCACTCACGTGCCCCCTCTCTCCTCCCATTCCTACAAAATCATCATCTAACTCTTGTTCCTCTCTGTTTTTCTTTTACTTTTCTACTTTCCACTCTCTTCTCTCTCACAACACAATCAGTGTGTGTCTCTTATGGACACTACTACTGCTAGAGAGAAGGCGACTCATCAAGTAATCCACCATCAAACTCTCCTACTTTAGTTCACTTCTCTCTTGCACCATTCATTCTCCTACTATTTTTCTTTTTCATTTTGTTATAATGGAGAACAAGAACCTGACCTCAAAATGTTTTTACCATAACCATTATCACATGTTGCAACTTGGGGTGAGGAGTGTAGCAGGTTGGCAGCCCCGTATCTACTGCAACCCAAGTCATTTTTTCCGGTTGTTTTTCTGTTTATGGTTTCTTCTAGTCCCAGGGGTGAGTGAAGAGCGTTGGGATGGAGTGGTTGTGACACAGTCAAACTTCCTAGCGCTTCAAGCGTTCAAGCAAGAGTTGGTTGATCCAGAAGGCTTCTTGCGAAGCTGGAATGACAGCGGCTATGGAGCTTGTTCTGGAGGCTGGGTTGGTATCAAGTGCGCTCAGGGACAGGTTATTGTGATCCAACTTCCATGGAAGGGGTTGAAGGGACATATCACTGAGAGGATTGGCCAACTTCGGGGGCTTAGAAAGCTTAGCCTTCACGATAACCAAATTGGTGGTTCAATCCCTTCAGCACTGGGACTTCTTCTCAATCTCAGAGGGGTTCAACTCTTCAACAATAGGTTCACAGGGTCCATCCCTCCTTCTTTAGGCTCATGTCCTTTGCTTCAGTCTTTAGACCTCAGTAATAATTTTCTCACTGGGGTAATCCCCATGAACCTTGGGAATGCCACCAAGCTTTATTGGCTTAACTTAAGCTTTAATTCCCTGTCTGGAAAAATACCAACCAGCCTAACCAGCTTAGCTTCTCTCACTTACTTATCTCTTCAACACAATAATCTCTCAGGCTCTATTCCTAACTCATGGAGTGGTAACTTGAAGAACCACTTCTTTCGGCTTCAAAATCTGATCCTAGATCATAACTTCTTGAGTGGAAGCATTCCTGCTTCTTTGGGAAGCTTGAGTGAACTCACAGATATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATCCCAAATGAAATAGGAAATCTTTCTAGGCTTAAGACAGTAGATTTTTCGAACAATGCCTTCAATGGAAGCTTGCCTGCCACGCTCGCTAATGTTTCCTCACTTACTCTCTTGAATGTAGAGAACAACCACATTGGCAGTCAAATCCCAGAAACTTTAGGCAGATTGCACAATCTTTCTGTTCTAGTTCTTAGCAAAAACCAATTTAGTGGCCACATTCCTCAGAGTATTGGAAACATTTCAAAGCTTACACAGCTTGATTTGTCACTGAATAACCTCAGCGGACAAATTCCAGGCTCCCTTGACAATCTGCGTAGTCTCAATTTCTTCAACGTTTCTCATAACCACCTCTCTGGTCCAGTTCCAACCCTACTTGCTAAAAAATTTAATTCAAGCTCATTTATGGGAAATATTCAACTATGTGGGTATAGCCCTTCAACCCCATGTCCCTCGTCAGCTCCTTCTGGTTCACCTCCTGAAATATCAGGACACCGTCATCAAAATAAACTAGGCACCAAAGACATAATTCTCATAGTGGCAGGAGTGCTCCTTGTAGTCCTGGTAATAATTTGCTGCATTTTGCTATTTTGCTTGGTAAGAAAAAGAGCAACCTCAAATGCAGAGGGCGGCCAGGCCACAGGGAGAGCAGCTGCATCTGCTGCCAGGACAGAAAAAGGAGTCCCTCCTGTGGCAGGCGAAGCTGAAGCAGGTGGTGAGGCGGGAGGTAAATTAGTCCATTTTGATGGACCATTGGCTTTTACAGCTGATGATCTCCTGTGTGCGACAGCAGAGATAATGGGAAAGAGTACGTATGGAACCGTGTACAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTGAAACGATTGAGGGAAAAGATCACCAAAGGTCAGAGAGAATTTGAATCTGAAGTTAGTGTTATAGGAAGAATTCGACACCCAGATCTTTTGGCATTAAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTTTAGTGTTTGATTACATGCCTAAGGGAAGTCTTGCTTCCTTCCTACACGCTCGTGGGCCAGAAACAGCCATTGACTGGCCTACAAGGATGAAAATAGCGCAGGGAATGGCTCGTGGCTTATTATACCTCCATTCCCAACAGAACATTATACATGGGAACCTTACGTCCAGCAACGTGCTGTTGGATGAGAATACGAATGCCAAAATAGCTGATTTTGGTCTTTCTAGGTTAATGACAACTGCTGCTAATTCTAACGTGATTGCCACTGCTGGAGCATTGGGATACAGAGCACCTGAGCTCTCGAAGCTTAAAAAAGCCAGCTCAAAAACTGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGCGTGGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTCGATGTAGAGTTGATGAGAGATGCTTCAACACATGGCGACGAGATGCTAAACACGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTCCAGCAAGTCCTTCAGCAGCTTGAAGAGATTAGACCAGACATATCAGCCAGTTCGGGAGACGATTTCGCCATCCCTTCGACCAGTGAATGAGCATTGGATTATATGTAGACAATTTTTGCATTTACTTTTCTGCATGGTTTGAGACTAACGTAGTACCGTGTAGGTAGGATAGTCTTATTATTCTTTCATTCTTACATTAATTTCTGCATGGTTTGAGTCCTAGTTTCTGTACATAGTGCTGTGCCTTTAAATCATTAAGTGCTCACTTTAACACTTCATTA 3011 0.4394 MENKNLTSKCFYHNHYHMLQLGVRSVAGWQPRIYCNPSHFFRLFFCLWFLLVPGVSEERWDGVVVTQSNFLALQAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLRGLRKLSLHDNQIGGSIPSALGLLLNLRGVQLFNNRFTGSIPPSLGSCPLLQSLDLSNNFLTGVIPMNLGNATKLYWLNLSFNSLSGKIPTSLTSLASLTYLSLQHNNLSGSIPNSWSGNLKNHFFRLQNLILDHNFLSGSIPASLGSLSELTDISLSHNQFSGAIPNEIGNLSRLKTVDFSNNAFNGSLPATLANVSSLTLLNVENNHIGSQIPETLGRLHNLSVLVLSKNQFSGHIPQSIGNISKLTQLDLSLNNLSGQIPGSLDNLRSLNFFNVSHNHLSGPVPTLLAKKFNSSSFMGNIQLCGYSPSTPCPSSAPSGSPPEISGHRHQNKLGTKDIILIVAGVLLVVLVIICCILLFCLVRKRATSNAEGGQATGRAAASAARTEKGVPPVAGEAEAGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVIGRIRHPDLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPETAIDWPTRMKIAQGMARGLLYLHSQQNIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKASSKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTHGDEMLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPDISASSGDDFAIPSTSE 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01107 848 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 260 829 - -
Pste8g01107 848 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 260 331 - -
Pste8g01107 848 Gene3D Ribonuclease Inhibitor 323 449 IPR032675 -
Pste8g01107 848 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 332 447 - -
Pste8g01107 848 Pfam Leucine rich repeat 183 242 IPR001611 GO:0005515
Pste8g01107 848 Pfam Leucine rich repeat 356 415 IPR001611 GO:0005515
Pste8g01107 848 FunFam Leucine-rich repeat receptor-like kinase 68 180 - -
Pste8g01107 848 FunFam Leucine-rich repeat receptor-like protein kinase 543 634 - -
Pste8g01107 848 FunFam Pollen receptor-like kinase 1 635 839 - -
Pste8g01107 848 Pfam Protein tyrosine and serine/threonine kinase 561 826 IPR001245 GO:0004672|GO:0006468
Pste8g01107 848 Pfam Leucine rich repeat N-terminal domain 71 107 IPR013210 -
Pste8g01107 848 Gene3D Phosphorylase Kinase; domain 1 564 635 - -
Pste8g01107 848 Gene3D Ribonuclease Inhibitor 67 221 IPR032675 -
Pste8g01107 848 Gene3D Ribonuclease Inhibitor 222 322 IPR032675 -
Pste8g01107 848 ProSiteProfiles Protein kinase domain profile. 558 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01107 848 SUPERFAMILY Protein kinase-like (PK-like) 562 831 IPR011009 -
Pste8g01107 848 SMART LRR_typ_2 282 306 IPR003591 -
Pste8g01107 848 SMART LRR_typ_2 229 252 IPR003591 -
Pste8g01107 848 SMART LRR_typ_2 402 425 IPR003591 -
Pste8g01107 848 SMART LRR_typ_2 133 157 IPR003591 -
Pste8g01107 848 SMART LRR_typ_2 330 354 IPR003591 -
Pste8g01107 848 CDD STKc_IRAK 564 829 - -
Pste8g01107 848 Gene3D Transferase(Phosphotransferase) domain 1 636 840 - -
Pste8g01107 848 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 181 258 - -
Pste8g01107 848 SUPERFAMILY L domain-like 106 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01107 Pste-Chr8 5765128 5768227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01107 60 831 Receptor kinase-like Gene Family AT3G51740 63.811 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g01107 PK_Tyr_Ser-Thr 5.3e-42 CL0016