Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01103 CTGAGTTTTTGAGTTGTAGTTTGTCTGAGATCAATGGAGGGCAGTGACATATCGAGAGTTGATAGTGCAAGAGGTAGCAGTGGTTCTAACCTATTGAGGAACAACAGCATGGATGTTTTCTCAACTTCTGAACGTGAAGATGACGAAGAGGCTCTCAAATGGGCTGCCATAGAGAGGCTACCATCGTATCTTCGCATTCGAAGAAGCATACTCAACAATGAAGATGGGAAAGGGAGGGAGGTTGACATCAAGAAACTAGGCCTCAGAGAGAGAAAGATTCTTGTGGAGAGGCTTGTGAAGATTGCAGAAGATGATAATGAAAGGTTCTTGGTGAAACTCAGAGAAAGAATGGACAGAGTTGGGCTTGATATTCCAACTGTTGAAGTTAGATTTGAGCATATAAATGTTGACGCACAAGTTTATGTTGGAGGAAGAGCATTGCCTTCAATGCTGAATTTCTTTGCTAACGTGATAGAGGGGTTCTTAAATTATCTTCGCATAATTCCAAGTCCAAAGAAACCGTTACATATACTTCAGAATATTAGTGGAATCATAAAGCCTAGAAGAATGACTTTGCTTTTGGGACCACCAGGTTCTGGAAAGACCACTTTGCTGTTAGCATTGGCTGGAAAACTTGGTAAAGATTTAAAACATTCTGGGAGAATAACATACAATGGGCATGGACTTGAAGAGTTTGTGCCACAAAGGACATCAGCTTATATAAGTCAACATGATAACCACATTGGAGAAATGACAGTGAGAGAGACACTGGCTTTCTCTGCTAGATGTCAAGGGGTTGGACAAAATTATGATATGTTGGCTGAAATTCTAAGAAGAGAGAAGCAAGCTAAGATTAAACCAGATTCTGATATTGATGCCTATATGAAGGCTGCAGCACTAGGAAAACAGAGGACAAGTGTAGTCACCGATTATATTCTCAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGCATCTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAAGGTTTTATTCATGGATGAGATATCAACTGGTTTGGACAGTTCCACTACTTTTCAGATAATCAACTCTATCCGGCAATCCATCCACATTCTCAATGGAACTGCACTAGTGTCTCTGCTACAGCCTGCACCAGAAACTTATGAACTATTTGATGACATAATACTATTAACGGATGGGCAAATTGTGTACCTAGGACCAAGGGAAAATGTACTCGAGTTTTTTGAATCAATGGGTTTCAAATGTCCTGAAAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTGACTTCAAAGAAGGATCAATGGCAATATTGGGCGCGTAAAGATGAACCTTATAGCTTTGTCACTGTCAAGGATTTTGCTGAAGCATTCCAATTATATCACATAGGTCAAAAACTTGGAGAGGAGCTAGCCATTCCATTTGATAAGTCTAAAGGCCATCCAAATGCATTGACGACAAAGAAGTATGGTGTTAGCAAAAAGGAGCTGCTGAGGGCTTGTGCTAGTAGAGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAAGCCACACAACTCATCTATTTAGCTATCATGACAACAACATTATTTCTACGAACTAAGATGCATCACAATACTGTGGAGGATGGAGGAACATACATGGGAGCTCTTTTCTTTGCAATCACTGTTGCAATGTTCAATGGAATATCAGAGCTAAATATGGCCATCGTGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTATTCTATCCTGCATGGGCTTATTCTCTTCCCCCATGGATTCTTAAAATACCAATAACCCTCGTAGAAGTAGCTATTTGGGAAGGCATATCTTACTATGCCATTGGCTTTGATCCAGATTTTTACTTGATAATCCTGTGCATTAACCAGATGGCGTCTTCACTATTTCGGTTGATGGCAGCATTAGGAAGGGATGTTATAGTTGCAAACACTGTTGGAGGTTTTGCATTACTTGTAGTTCTGGTTTTGGGAGGATTTGTGATTTCACGAGAGAATGTTCACAAATGGTTTCTGTGGGGTTACTGGTCCTCACCACTGATGTATGGGCAGAATGCTATAGCTGTGAATGAATTTCTTGGTCATAGTTGGAGAAAGGTTCTTCCTGGTTCCAATGAAACACTGGGAGTTTTGGTACTGAAAACTCGTGGACTTTTCCCAGAAACTTATTGGTATTGGATTGGAGTAGGAGCACTAATTGGTTATGTTTTTCTGTATAATTTTCTGTTCACCATGGCTTTGCAATATCTAAGTCCATTCAGAAAGGATCAAGCAGGACTATCCCAAGAAAAATTGCTTGAGAGGAATACTTCAACAGCTGAAGAGTTAATGCAATTACCAAATGGAAAGAGCTCTTCTGAAACAAAGACGATAGAAGAAGCAAACATATCATCCGGATCTTTTTCTGGAAGAGTTAGTGATGACAAAGCTAACCGAAGTGGAGGGAGGGGTATGGTTCTTCCTTTTCAACCTCTATCTCTCACTTTCGATGAGATAAAATATTCTGTAGATATGCCACAGGAAATGAAAAAACAAGGAGAATTTGAGGACCGTCTAGAACTTTTGAAGGGTGTTAGTGGTGTCTTTAGGCCAGGAGTACTAACAGCTTTGATGGGAGTAAGTGGTGCTGGTAAAACTACTTTAATGGATGTTTTAGCTGGAAGAAAAACTGGTGGGTATATACAAGGAAGCATCACAATATCTGGGCACCCGAAGAGGCAAGAAACATTTGCTCGCATATCAGGATACTGTGAACAATTTGATATTCATTCACCCAATGTTACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGATTGCCCTGTGAAGTTGATCGCGCAACTAGAAAGATGTTTATTGAAGAAGTTATGGAGCTAGTAGAGCTCAACTCAATAAGAGAAGCACTGGTAGGATTGCCTGGTGAGACTGGACTTTCAACTGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAATCCATCAATAGTATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTGAGAAACACAGTGAACACAGGACGAACCGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTTGATGAGATCAAAGATGGTTATAATCCTGCAACTTGGATGTTGGAAGTTACATCAGCAGGCATAGAAGCAAGTCTCAAGGTCAACTTCACCAATGTGTACAGAAAATCAGAACTATACCGGAGAAACAAACAATTGATCCAAGAGCATAGTATACCTCCTCAAGGTTCAAAGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGTTGACACAATGTAAAGCATGTCTATGGAAACAACATTTATCATATTGGAGGAATACATCATATACAGCAGTTAGACTCCTATTTACATTGCTAATAGCGCTGTTATTTGGGATCATATTTTGGGACATTGGCCTGAACAGGAGAAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTGACCTTCATTGGAGTGCAAAATGGTGCCTCAGTGCAGCCTATAATAGCAGTTGAGAGAACCGTCATTATTGAACTTCCCCACATCTTGGTTCAGACCCTGATGTATGGTATTATAGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTACACCTTCTATGGTATGATGACCATGGCCATTACCCCCAATGCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATATGGAGTCTTTTCTCAGGCTTCATCATCCCCTTATCTAAAATACCCATATGGTGGAAGTGGTACTATTGGATCTGCCCTGTTGCATGGACCTTGAATGGATTGGTGGCTTCCCAATATGGAGACAACAGGGACAAACTTGAGAATGGTCAAAGGGTTCAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGATTTTCTAGGAGTGGTTGCAATTGTGGTGGCTGGTTTCTCAGTATTGTTTGCCCTTATCTTTGCCTTCGGAATCAAAGTATTCAACTTCCAAAAACGTTGAAATCATTGCAATGCTTCTCACTCTAGAGTCTAGTGTTTTATGCATTCATTTGAAGCATTGAGCCCACGGTCTCAAATTCATTGAAAATAATTTTTAAGAGAAACGTCTACTCGTGATGGATGAACTGAATTTTGCAATTCCTTTGTAAGAGATTCTTTGACAGTATATACGTTGGTTCACTTGTACTCAATTCTTAATATCATTTTAGCTTGTAAA 4410 0.4002 MEGSDISRVDSARGSSGSNLLRNNSMDVFSTSEREDDEEALKWAAIERLPSYLRIRRSILNNEDGKGREVDIKKLGLRERKILVERLVKIAEDDNERFLVKLRERMDRVGLDIPTVEVRFEHINVDAQVYVGGRALPSMLNFFANVIEGFLNYLRIIPSPKKPLHILQNISGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKDLKHSGRITYNGHGLEEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGQNYDMLAEILRREKQAKIKPDSDIDAYMKAAALGKQRTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYLGPRENVLEFFESMGFKCPERKGVADFLQEVTSKKDQWQYWARKDEPYSFVTVKDFAEAFQLYHIGQKLGEELAIPFDKSKGHPNALTTKKYGVSKKELLRACASREFLLMKRNSFVYIFKATQLIYLAIMTTTLFLRTKMHHNTVEDGGTYMGALFFAITVAMFNGISELNMAIVKLPVFYKQRDLLFYPAWAYSLPPWILKIPITLVEVAIWEGISYYAIGFDPDFYLIILCINQMASSLFRLMAALGRDVIVANTVGGFALLVVLVLGGFVISRENVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVLPGSNETLGVLVLKTRGLFPETYWYWIGVGALIGYVFLYNFLFTMALQYLSPFRKDQAGLSQEKLLERNTSTAEELMQLPNGKSSSETKTIEEANISSGSFSGRVSDDKANRSGGRGMVLPFQPLSLTFDEIKYSVDMPQEMKKQGEFEDRLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIQGSITISGHPKRQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPCEVDRATRKMFIEEVMELVELNSIREALVGLPGETGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDEIKDGYNPATWMLEVTSAGIEASLKVNFTNVYRKSELYRRNKQLIQEHSIPPQGSKDLHFDSQYSQTLLTQCKACLWKQHLSYWRNTSYTAVRLLFTLLIALLFGIIFWDIGLNRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVIIELPHILVQTLMYGIIVYAMMGFDWTTSKFLWYLFFMYFTFLYYTFYGMMTMAITPNAHVAAILSSAFYAIWSLFSGFIIPLSKIPIWWKWYYWICPVAWTLNGLVASQYGDNRDKLENGQRVQEFVKSYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKVFNFQKR 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01103 1386 Gene3D - 859 1070 IPR027417 -
Pste8g01103 1386 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
Pste8g01103 1386 SMART AAA_5 176 401 IPR003593 GO:0016887
Pste8g01103 1386 SMART AAA_5 881 1073 IPR003593 GO:0016887
Pste8g01103 1386 Pfam ABC-2 type transporter 382 434 IPR043926 GO:0140359
Pste8g01103 1386 Pfam ABC-2 type transporter 1217 1328 IPR013525 GO:0016020|GO:0140359
Pste8g01103 1386 Pfam ABC-2 type transporter 503 709 IPR013525 GO:0016020|GO:0140359
Pste8g01103 1386 Gene3D - 154 458 IPR027417 -
Pste8g01103 1386 Pfam Plant PDR ABC transporter associated 714 775 IPR013581 -
Pste8g01103 1386 Pfam ABC-transporter N-terminal 91 142 IPR029481 -
Pste8g01103 1386 MobiDBLite consensus disorder prediction 1 24 - -
Pste8g01103 1386 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Pste8g01103 1386 CDD ABCG_PDR_domain2 841 1066 IPR034003 -
Pste8g01103 1386 FunFam ABC transporter G family member 34 154 458 - -
Pste8g01103 1386 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1066 1386 - -
Pste8g01103 1386 MobiDBLite consensus disorder prediction 9 24 - -
Pste8g01103 1386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 868 1057 IPR027417 -
Pste8g01103 1386 Pfam ABC transporter 872 1024 IPR003439 GO:0005524
Pste8g01103 1386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 424 IPR027417 -
Pste8g01103 1386 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 844 1096 IPR003439 GO:0005524
Pste8g01103 1386 FunFam ABC transporter G family member 40 858 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01103 Pste-Chr8 5746459 5754707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01103 869 1056 Calmodulin-binding Proteins AT2G36910 25.500 4.08e-06 49.7