Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01094 TGAGTTACGGTTGGAGTTTCTGTCCGTCCACGGATACAAAAAACGACTTCAACCAAAAGTCAAAGCCATGGACAGTGAAATATGCATTCATATCCCAGACACAAGGCAATTATCGTTGGAAATTATTGGCACAACCAAAGTCCAAAGAAACAGCCTAGTCTTTTGTGTTTCGCATGATCACTTCCAACATCCAACGATAATCACCAGTTCTCACATGCATCCACCTCGCAACCTGCTTTCTCCGTCGCCGTCGACCGGACCCGACCAAATCCACGCCGATTTTTATTCGGTGCGGCGGTTGACCAGGCAGAGGAACCTTCGCCACCTCGGCGACCAAGACATTGGTTTCTTCCATTCCGATGACTTTTCTTCTTTTCCAGGTTCCCCGGAGTACCCATCCCACGGCGATTCCGACCACCGCTCTCTCTCTGCTCTGCCGCATCCGCTGCCTCTTCCCGAAGCTCTGTTGACCCGTCGAACCAAGTCAATCAACTGCGGTTCCGTAAATCGTCGCCTCTCATCGTCGTTAGAACAACATGGCTTTGCTGTTTCCAGTAACAGAGGGTATCAAGATACGGTGACGAGTACGAAACCTACACTCATTTTAGATAAATCCTCCTCGGAGGATTCCACTCTTGCAAATGCAAAATACAATCTGAGAGAGCATATTCCCGCAGCAAGTTTCTTGACAGGCAGTAGTTCATGTAATAACCGCAGAGTAGTGTCTCATGACAATGACTCTGAAGTTAATCCCCACTTGAATTTGGGTGTTGCTGCCAAGCCCAAGAGTGCCCCAACAAGTGTAATCACTAGTCCTGAAACTAGTCCATGTAGATCAGGAAATGTAGATTGCTTTGATCCTACCATCAACTTCTATCTTGAAGTCAATGACAAATTGAAAGTGTTATCATCTAAAATTCTTAAACGTCCAGACCATTCTCCTCTTAATTGCCCGCTGAACCTCAGTCAGGAGGGATCTCAGAACCATAAACTTTTGTCCAGGGTGAGCCTTGAAAATAACCTTTTTGATGCCCATCCGTTACCCCTTCCTCCTAGAGCTTCATTACCAGCACAATTATCTGTGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGTGGAACCTTCGGAAGTGTTTTTCATGCAACCAACCTAGAAACTGGAGCCTCGTGTGCGATGAAGGAGTTCAATTTAATTCCTGATGATCCTACATCTGCTGAGTCCATGAAACAACTGGAACAGGCTGTTATTCTTAGAAGTTCCATTGTCCAGGAAATCAAAATCCTCCGTCAACTACGCCACTCCAACATTGTGCAGTATTATGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAATATGTTCACCCAGGATCAATCAGTAAATTTATGCGTGAACATTGTGGAGCTATAACAGAATCTGTGGTTCGCAATTTTACTAGGCATATTCTCTCTGGATTAGATTACTTACATAGTAACAAAACCATCCACAGAGATATCAAAGGTGCAAACTTGCTGGTCAATGAATCAGGAATTGTCAAGCTTGCAGACTTTGGCCTGGCCAAAATTATGATGGGGAATTCATATGACCTTTCTTTGAAGGGTAGTCCTCACTGGATGGCTCCAGAGGTCGTGAAAGGTACCATAAAGAATGAATCCAATCCTGATGTTGTCACGGCCATTGATATATGGAGCTTAGGGTGCACCATTATAGAAATGTTGACAGGAAAACCTCCTTGGAGTGAAGTAGAAGGGCCTTCAGCCATGTTCAAGGTACTGCAAGAATCCCCACCTATACCTGAAACTTTATCTTCAACAGGAAAGGATTTCCTCCGGCAATGTTTCCAAAGGAAGCCTGCAGATCGACCATCTGCGGCAAAGCTTCTTAAGCATGCCTTTGTGCAGAATTTGCAAGACCAAGAAGTTCTATTTCATCCACAACCTTATCCTAGAGGAGACCTAGGACCTGGAGATAATTCAGCTAGTCTTAAAGACGCTACCGAAAATAGACGTGGCATAATGCAAACCTCCATTATTAGCACACGAATTTTTAACAAATTTCAGAAATTAATCGGCGATACTTCCGAACAAAGCAATGCAAAGGGACCTAATCATATTATACCTTATCATTCTTATGTTCCAGAAGCGAACATTCCTCAATCTTCATTTAGACCTGGTACCCTCAATTACATGTCTGTCGCAAATTCAAGAATCGTGAGGATGATGATAACCAACTTTTGAAGCATGGCGTCACGCTTAAAAGTTGGAGGGATATCATGCAGCTGGAAAGGAGCTGGTAAATGAATTTTGCAAAAACTCCACTGGCAGGGATTTAGAAGCTGGTCATTCATCAATCATGAATTCATGATGTTATTTTTTTATTAAATATATTCAAAGATTTAGAGGAAATTGTCGTAATTCACTAGTATTTTTTTTGTACTCGATGATAATGAGGCTCTGATACTTGTGCTTGTTCTGAGGCAAGAAATTAAATATGTGAATAACATAAATATATATATAAATTGTATAATTTTGGAAAACCATTCTTTGACGAGTGTAATTAATATTTACGGTGACTTTAATAAATT 2595 0.4193 MDSEICIHIPDTRQLSLEIIGTTKVQRNSLVFCVSHDHFQHPTIITSSHMHPPRNLLSPSPSTGPDQIHADFYSVRRLTRQRNLRHLGDQDIGFFHSDDFSSFPGSPEYPSHGDSDHRSLSALPHPLPLPEALLTRRTKSINCGSVNRRLSSSLEQHGFAVSSNRGYQDTVTSTKPTLILDKSSSEDSTLANAKYNLREHIPAASFLTGSSSCNNRRVVSHDNDSEVNPHLNLGVAAKPKSAPTSVITSPETSPCRSGNVDCFDPTINFYLEVNDKLKVLSSKILKRPDHSPLNCPLNLSQEGSQNHKLLSRVSLENNLFDAHPLPLPPRASLPAQLSVKGQWQKGKLIGRGTFGSVFHATNLETGASCAMKEFNLIPDDPTSAESMKQLEQAVILRSSIVQEIKILRQLRHSNIVQYYGSEIVGNHLYIYMEYVHPGSISKFMREHCGAITESVVRNFTRHILSGLDYLHSNKTIHRDIKGANLLVNESGIVKLADFGLAKIMMGNSYDLSLKGSPHWMAPEVVKGTIKNESNPDVVTAIDIWSLGCTIIEMLTGKPPWSEVEGPSAMFKVLQESPPIPETLSSTGKDFLRQCFQRKPADRPSAAKLLKHAFVQNLQDQEVLFHPQPYPRGDLGPGDNSASLKDATENRRGIMQTSIISTRIFNKFQKLIGDTSEQSNAKGPNHIIPYHSYVPEANIPQSSFRPGTLNYMSVANSRIVRMMITNF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01094 726 SUPERFAMILY Protein kinase-like (PK-like) 341 695 IPR011009 -
Pste8g01094 726 Pfam Protein kinase domain 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01094 726 Gene3D Transferase(Phosphotransferase) domain 1 340 629 - -
Pste8g01094 726 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 196 622 - -
Pste8g01094 726 MobiDBLite consensus disorder prediction 105 124 - -
Pste8g01094 726 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Pste8g01094 726 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01094 726 ProSiteProfiles Protein kinase domain profile. 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01094 Pste-Chr8 5695336 5700935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01094 321 616 MAP Kinase Kinase Kinase AT5G66850 62.500 7.16e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste8g01094 Pkinase 6.3e-66 CL0016