Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01091 GTGAAGCTCCCAAGGAAGGATAAAAGACCAAGTGTTGCGTGGTGGTCCAATCCAATACAGAACATTGATGACGACATGGAAACAGAAGATAGCATCTGTGTCGAACAGGAGTGAGGTTGAGGAGCCTCTTCTGGCATCGGAAGATCCGAATGAGCAAAATGGATCGGTGACCGGAGCCATCCTCAACATATCAACGACCATGGTTGGCGCCGGAATCATGTCGTTTCCGGCCACCATGAAGGTGCTGGGCATAGTTCCCGGCTTCCTGCTCATCGTCTTGGTCGCACTGCTCACAGATGTCACTGTCCAATTCATGTTGAGCCACACTAATTCCTGTAAATCCACTACTTACGCCGCCATGGTGGCAGAATCCTTTGGTTTCATAGGATCCCTCGCCGTTAAGATCTGCGTCGTCATAACCAATTTGGGGATTCTTATCATCTATTTCATTATTCTTGGAGACGTGCTCTGTGGAAATGTGTCGAACGGAACCATACACTTGGGTATTCTACAAGAATGGTTTGGCATCAATTGGTGGACTTCTCGTGCTTTTGCTCTTCTTATTGTTTCGCTCTTCATAATGCTTCCACTCGTTATGTTACGCCGTGTTGATTCATTGAGGTATAGTTCTGCAATATCAATCCTTCTAGCGTTGGTGTTTGTTGTAATATGCTCATCAATGGCGTTTAGTGCATTGCTGTCCGGCAAAACTCAGACACTAAGGATAGTACCTGATTTTTCTAAAGTCACTGTCCTTGATCTTTTCACCACCATCCCAGTGTTTGTCACGGGTTTTGGATTCCATGTCAATGTTCATCCAATTAGAGCAGAGCTTGGGAAAGTTGCACAGATGGGTTTGGCTGTGCGAATTTCGTTACTAATCTGTGTGGTTATTTTCTTTGCCATTGGCTTCTTTGGGTACCTATTGTTTGGTGACTCCATCATGCCTGACGTGTTGGTAAACTTTGATCAAAACTCCAGTACCAATTTTGGTCGATTGCTGAATGATGTTGTTAGATTAAGCTATGCACTACATCTTGCACTTGTCTTCCCTGTCATGAATTACTCCTTGAGGGCCAACGTATATGAATTAATCTTCACAAACAAAAATAAGACTCCCCTTGCATCAGACACCCTCAAATTTGTGTCACTCACTCTTACTTTGTTATCCCTCACATACTTGCTGGCAGTGGCCATCCCCAACATATGGTATTTTTTTCAGTTCTTGGGATCCACTACCGTTGCTTTCACCTCATTCATTTTCCCTGCTGCAATTGTTTTAAGGGACATACATGGCATATCAAAGACAAAAGATCAAGTCATGGCAATGGTGGTCATTGTTATAGCTATAGGAACTAGTGGAATTGCTATATGGACCAACTTGAATGGTTCACAGGTCGATAAGTGATTAATCATGTCGATATATATATATATAATACATACTCTTTTCAAATTTTAGGGAAGCCTAAAGATTCAAATGGATTAACATCTTGTATAGTTGTGAAAATAGTCGCATTAATCTGGTCCTTTTTT 1533 0.4234 MTTWKQKIASVSNRSEVEEPLLASEDPNEQNGSVTGAILNISTTMVGAGIMSFPATMKVLGIVPGFLLIVLVALLTDVTVQFMLSHTNSCKSTTYAAMVAESFGFIGSLAVKICVVITNLGILIIYFIILGDVLCGNVSNGTIHLGILQEWFGINWWTSRAFALLIVSLFIMLPLVMLRRVDSLRYSSAISILLALVFVVICSSMAFSALLSGKTQTLRIVPDFSKVTVLDLFTTIPVFVTGFGFHVNVHPIRAELGKVAQMGLAVRISLLICVVIFFAIGFFGYLLFGDSIMPDVLVNFDQNSSTNFGRLLNDVVRLSYALHLALVFPVMNYSLRANVYELIFTNKNKTPLASDTLKFVSLTLTLLSLTYLLAVAIPNIWYFFQFLGSTTVAFTSFIFPAAIVLRDIHGISKTKDQVMAMVVIVIAIGTSGIAIWTNLNGSQVDK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01091 446 PANTHER AMINO ACID TRANSPORTER 20 428 - -
Pste8g01091 446 Pfam Transmembrane amino acid transporter protein 31 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01091 Pste-Chr8 5682840 5687811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01091 16 439 Amino Acid or Auxin Permease AAAP Family AT3G56200 52.103 3.60e-148 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01091 8 5682840 5687811 Pste8g01091 8 5682840 5687811 ECH
Pste7g02267 7 20980479 20982771 Pste8g01091 8 5682840 5687811 PCT