Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01079 GTTTTTTCCTTTTTCGTGTTTTTTTTTTTATTCAACAATTGGATAACACTTAAACGGCACTACTGCATTTTTTTTCTTTTCCTTCCCTCTTCTCACTTTCTCTTTCTCTCTGCGCGGTTAACAGAAAAACGCTGAAATCCAATCCAATCACAATAATCGATTCACACGTTCGTTGTGTGTGTGTGTGTGACGATGGCATATTCAAGTTCCTGGAGCAGAGCACTCGTCGCGATCTCGCCGTACACCTTCTCTGCCATAGGAATCGCCGTCGCCATTGGCGTCTCCGTCCTCGGCGCTGCCTGGGGGATCTACATAACCGGTAGTAGCTTGATCGGCGCTGCAATCAAGGCTCCTCGAATCACTTCCAAAAATCTCATTAGTGTAATCTTTTGTGAAGCTGTTGCTATATATGGTGTTATTGTGGCTATTATTCTTCAAACAAAACTAGAGAGTGTTCCAACAAAAAGTATCTATGAACCAGAGTCTCTTAGAGCAGGATATGCAATCTTCGCCTCCGGATTAATCGTTGGCTTCGCAAATCTAGTTTGTGGGTTGTGTGTAGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCCCAGAACTCCTCTCTCTTTGTGAAAATTCTTGTGATTGAGATCTTTGGCAGCGCACTAGGGCTATTCGGAGTTATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCAGCGAAATAGTTTCGCCTGTATTAGAGAATGTGGTGTGGGAATGCAATTATGGTAGAGTACAATATATCTTCTGTACTGTCCGGGATTAAATTTTTCTGTGTTTCCTGTTGGTAGAAATGTAAAATCCAGCGTAATAGTTTGCCTCCATTACAACTTAAATAGACGGTATTATTTACCAATGAGTTGTTAGAAGGTCTTGTGTATCATAGAGATATCAGTCTGTTGGTTGAATTTTTATATTTTTGGAGGACTATTGAATCTTTCATTAATCAATAAAAAAGTGAATTTATTTGGGCTTGTGAATAAAGTCATTAAGCAGTTTTGTTGAATTGCTGAATTGAAGGGTCTCTAGCTGGGTTCATTGAGGTGCTAAATAGTTAGGTTATTCTGACTATGAAGAATAATGTTAATGTTTTAATATTGGGATTCAAAAACATTTGTGATTAATAGGAATGAGCCTGAGATTAACCAAGTT 1183 0.3905 MAYSSSWSRALVAISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPTKSIYEPESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01079 174 PRINTS Vacuolar ATP synthase 16kDa subunit signature 117 143 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01079 174 PRINTS Vacuolar ATP synthase 16kDa subunit signature 61 85 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01079 174 PRINTS Vacuolar ATP synthase 16kDa subunit signature 35 59 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01079 174 PRINTS Vacuolar ATP synthase 16kDa subunit signature 144 167 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01079 174 CDD ATP-synt_Vo_c_ATP6F_rpt2 101 165 - -
Pste8g01079 174 CDD ATP-synt_Vo_c_ATP6F_rpt1 19 81 - -
Pste8g01079 174 SUPERFAMILY F1F0 ATP synthase subunit C 15 84 IPR035921 -
Pste8g01079 174 FunFam V-type proton ATPase proteolipid subunit 17 172 - -
Pste8g01079 174 SUPERFAMILY F1F0 ATP synthase subunit C 98 166 IPR035921 -
Pste8g01079 174 Gene3D - 17 171 IPR035921 -
Pste8g01079 174 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 169 - -
Pste8g01079 174 Pfam ATP synthase subunit C 22 81 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pste8g01079 174 Pfam ATP synthase subunit C 106 165 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01079 Pste-Chr8 5625238 5629400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01079 3 174 Primary Pumps ATPases(2) AT2G25610 90.116 6.67e-107 303