Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01073 GGTGATTACTGCTTGCTCTTGGTTGTTGTAGTGGGTGCAAGTGCAAGTATGGGTTCTGGGGCAGAGCTATGCAGTGACTTCTACTCCTGCTCCTGCCCAAACTTGTTGGCTATAGTGAAGGAAGGAGTGGCTGATGCCCTTCAAAAAGAACCACGCATGGGAGCATCCTTACTCCGATTGCATTTCCATGACTGCTTTGTAAACGGTTGTGATGCATCAATACTGTTAGATGATACAAGCGAGTTCACGGTAGAGCAAACAGCAGCATCCAACAAGCAATCAGTTAGAGGTTTCAACGTCATTAATGATATTAAACACTGTGTGGAGGAAGAATGCCCCGGAGTCGTTTCCTGTGCCGATATTCTTGCTTTGGCAGCTCCAGATTCTGTACTTTATCATTCCCGCGCCTTATCTGCTCTCGTCAACAATTTTGCTAACCAAGGCCTCTCCGTTACAGATTTGGTGACTCTTTCAGGGGCACATACCATTGGCCTATCTGAATGCAAGAATTTCCGAGCACACATCTACAATGACTCAAACGTTGAGCCCTCCTACCGGAAGTTCCTGCAGAGCAAGTTCCCGAGAAGTGGAAATGACAATGTACTAGAACCCCTTGACCACCAAACTCCAATACATTTCGATAATCTATACTTTCAGAATTTGGTGAGTAAAAAGGCCCTTCTTCATTCCGATCAAGAGCTGTTCAATGGCAGTTCTACTGACGATCTGGTACGAAAATATGCTTCCAATAGTGCAGCATTCTTTGAAGACTTTGCTAAGGGCATGATCAAAATGAGCAACATCAAGCCTCTCACAGGAACCGAGGGCCAGACCAGAATCAATTGTGGGAAAGTCAATTAAATGTCAGCAAGTGATGTATATGTTTAATATAAATTTAATTTCCAAGCTTCAAAATTATGTCAAATAGCTTTATCCTCGGACTGTCGAGCAACTTGGTTTATCATCAATAAACTGCTTAGTTTTATGCGTATA 993 0.433 MGSGAELCSDFYSCSCPNLLAIVKEGVADALQKEPRMGASLLRLHFHDCFVNGCDASILLDDTSEFTVEQTAASNKQSVRGFNVINDIKHCVEEECPGVVSCADILALAAPDSVLYHSRALSALVNNFANQGLSVTDLVTLSGAHTIGLSECKNFRAHIYNDSNVEPSYRKFLQSKFPRSGNDNVLEPLDHQTPIHFDNLYFQNLVSKKALLHSDQELFNGSSTDDLVRKYASNSAAFFEDFAKGMIKMSNIKPLTGTEGQTRINCGKVN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01073 270 CDD secretory_peroxidase 6 269 IPR033905 GO:0004601|GO:0042744
Pste8g01073 270 Pfam Peroxidase 24 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 Pfam Peroxidase 120 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 ProSitePatterns Peroxidases active site signature. 38 49 IPR019794 GO:0004601
Pste8g01073 270 SUPERFAMILY Heme-dependent peroxidases 7 270 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Plant peroxidase signature 40 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Plant peroxidase signature 204 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Plant peroxidase signature 16 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Plant peroxidase signature 244 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 ProSitePatterns Peroxidases proximal heme-ligand signature. 137 147 IPR019793 -
Pste8g01073 270 Gene3D - 10 117 - -
Pste8g01073 270 FunFam Peroxidase 116 249 - -
Pste8g01073 270 PRINTS Haem peroxidase superfamily signature 38 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Haem peroxidase superfamily signature 137 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 Gene3D - 250 270 - -
Pste8g01073 270 ProSiteProfiles Plant heme peroxidase family profile. 6 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01073 270 Gene3D Peroxidase, domain 2 120 249 - -
Pste8g01073 270 PANTHER PEROXIDASE 72-RELATED 119 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01073 Pste-Chr8 5612074 5614953 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01073 5 270 Peroxidase AT5G05340 52.013 6.60e-104 303