Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01046 ATGAATGAATGGAACAGGTTCCCCTTTACTCCATCTCAGTGGGAAGAGCTTGAGCATCAAGCTCTTATCTTCAAGTACATCATTTCAGCTGGATACAACTATCTGCAAATGGATTTGCATGAGGATAGAAAAATAGACCCTGAGCAAGGTAGGTGTAGAAGAATTAGTGGCAAGAAAAAGAGCTGCTCAAAAGAGGACTACCCTGATTCAAAGAATGATGAAATGTTGCATGAAACAACAGAGAATGAGAAGCAGAATCGTGGAAAAGAGAAGATAAGTGTTTCAAAATGCTCGTGGCCCTCATTAACAGAAAGTTCTGACTCAAGCATTGATACAACATCTTCATATTCATCTGGTTATTCCTGCCCCTCATGA 375 0.4 MNEWNRFPFTPSQWEELEHQALIFKYIISAGYNYLQMDLHEDRKIDPEQGRCRRISGKKKSCSKEDYPDSKNDEMLHETTENEKQNRGKEKISVSKCSWPSLTESSDSSIDTTSSYSSGYSCPS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01046 124 MobiDBLite consensus disorder prediction 96 124 - -
Pste8g01046 124 PANTHER GROWTH-REGULATING FACTOR 5 8 83 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste8g01046 124 SMART QLQ_2 7 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g01046 124 MobiDBLite consensus disorder prediction 50 124 - -
Pste8g01046 124 ProSiteProfiles QLQ domain profile. 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g01046 124 Pfam QLQ 8 29 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g01046 124 MobiDBLite consensus disorder prediction 50 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01046 Pste-Chr8 5512648 5513412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01046 6 71 GRF Transcription Factor Family AT3G13960 45.263 6.01e-18 76.3