Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01010 CCGAAAATAAGAGGGTTGAGTGTTAGGGAAGTTGTGTTTTTACGAGATCTAGCAGAAGAAGAAACCTGGATTGTTGAGTTCACGTGCCAACCAAGAATCTCGAAGACCCCAAAATCCAACAATTCACCATGATCCAAATCCCTCTCTATAAACCAACCTTCATCAAAATCCAGTACTAGAATCGAATGAGCATTCATAATATTATTATCACATCAAACTTGCAATAACAAACCAAACTTGCCTATAATTTCTCTTTCTCTCCGTTTTTCACACCCCCTTTGCCAGAAATATCATCTTTACCCCTCCTTCTCCACCTTTTCTCGATCTCTGTCTTTTGAATCGTTTTCCTGTTCTGGGTCTCTCCTCACTTCCAAAAAGATCTCATCTTTCGCCCTGTTTTCTTCAAAACCCCTCTTTCTTTCTTCTTTCTAATCGTTGTTCAATTATGAGGAAAAGAGAGAGGGAGAATCCTTGTGGCGTGTGTGGCCACTATCACAAATATGAAGAAGGGGAAGTCTGTTCGATTTGCGGTCACAGAATTCCGGTTGGATCAGAGAAAACTTCCATACAAGTGAGTGCTTTTCCTTCTGTGATTCTGCCGGAATTTCTTTACCTAGGAAGTTATGACAACGCTTCCCGCTCTGAGCTTCTCAAAACTCAGGGGATTTCTCGTATCCTCAATACTGTCCCTTCTTGTCAAAATCTCTACAAGAATTCATTCACCTATCACTGTCTCCCAGATGACAAAACTTTGCCATTTGATGAAGCGATTCAGTTTTTAGAGCAATGTGAGAAGGATAAGGAACGTGTTCTGGTTCACTGCATGTCAGGAAAGAGTAGGTCTCCTGCTATTGTGATTGCATACTTGATGAAATCCAAAGGATGGAGACTTGCACAGAGTTATCAGTGGGTAAAGGAACGGAGACCTTCTGTTGAATTAACTCAAGATGCCATCATGGCCACTCTGAGACAGTCACATTATCACCTCTCACCTGGGTTGGCTATGGCTACCCCCCTAAGGCTCTATGTTGATCCAAGAGATACCCCTGGCTCCTCCCCACTTTCTGTTGAATCCTTCAATGAAATTCCAATGCCAACATGTTTTGAACTTATGCTGTGTGTATACCAGCAACTGCAGGAGTTTGAGCAAAAGGTATATGGATTGATCAACAGCGGGAGTGCTCTGCTGCCCAGTTTCTCGCCCATGGTACCTCCTTCAATTAGCTTTGGTTTCCCAAAGATTAATGATCCAGCTCAGCTCCCTTCCTTCAGCACTGCTGGAAGTCCTTCCATCTTTACACGTGCACCCCTAGACATTGCTCCTACCGAGTTCACATTCGGAGCAGGTCAGACGCAGAAGAATGTGGCTGGAAGTCCCTTTAATGCAAATCCACCTAATCCTAATGGTACTGATATCCAAATGGATGGTTCTTGATCCTCACCAGCCACATGTGTGATTAAGCTGCTTGACAATTTGGCATGTGGTAAAGTTTAGAGGTACCAGACAGCCAGTCAAGGTGCAATAATCATAAGTGACTTGTGAATTCTATACCAACTTCTTTTTTACCTTGTTTTTCTCAAATATTCTCATAGTTATCTCTGGTTGTAGTATTGAGTTACAGCATATTTTACTGGCCTCAGATCTGCGGGACAATATCCAGTTTTTAATATTACTAGCTAAATCTTCTCTATAAAGTATACAAATAGTAAACAATCTAATTGTGGAACCGCTGTTCTGAAATATACAAAAATTCATGGACAAGTTTTTGAAATTCATTATCAATTTTTGAC 1791 0.4143 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKERVLVHCMSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTQDAIMATLRQSHYHLSPGLAMATPLRLYVDPRDTPGSSPLSVESFNEIPMPTCFELMLCVYQQLQEFEQKVYGLINSGSALLPSFSPMVPPSISFGFPKINDPAQLPSFSTAGSPSIFTRAPLDIAPTEFTFGAGQTQKNVAGSPFNANPPNPNGTDIQMDGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01010 329 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Pste8g01010 329 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 183 IPR020422 GO:0006470|GO:0008138
Pste8g01010 329 Gene3D Protein tyrosine phosphatase superfamily 36 183 IPR029021 -
Pste8g01010 329 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 167 IPR029021 -
Pste8g01010 329 CDD DSP_plant_IBR5-like 47 176 - -
Pste8g01010 329 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Pste8g01010 329 FunFam Protein-tyrosine-phosphatase IBR5 36 181 - -
Pste8g01010 329 MobiDBLite consensus disorder prediction 302 329 - -
Pste8g01010 329 SMART dsp_5 46 176 IPR020422 GO:0006470|GO:0008138
Pste8g01010 329 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 222 329 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Pste8g01010 329 Pfam Dual specificity phosphatase, catalytic domain 55 165 IPR000340 GO:0008138|GO:0016311
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01010 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.331 5.25e-98 285