Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01006 CTAATTTCGACCTACTATAAAGCTTCTGTGCTGGGTATCCACCCAAAACAAAAGATTAATGAACACGATGAGTCTGGCGTGGGTATTGTTGTTAACTCAAATTGTGGTACTAGCGACAAATTTGGAGGCGAAGAAGAATATCCCAGCAGTGATTGTTTTCGGAGACTCCTCGGTGGATTCTGGGAATAACAACTTGATAGATACTGTTTTGAAGAGCAATTTCAGGCCCTATGGTCGGGACTTCGAAGGTGGTCGTCCCACGGGACGATTCTGCAACGGTCGTGTCCCCCCAGATTTCATTGCCGAGGCTTTTGGTATCAAACGTACCATACCCGCATACTTGGATCCTGCTTATACCATTCAGGATTTTGCTACTGGGGTTTGCTTTGCCTCTGCTGGAACTGGATATGATAATGCTACTTCTTCTGTACTAAATGTGATACCACTGTGGAAGGAGTTAGAGTTGTACAAGGAGTATCAAGGGAAATTGAGAGCCCATGTGGGAGTAGAAAAAGGCAACGAGATCATAAGCGAAGCGTTGTACCTGATGAGTTTAGGAACCAATGATTTCCTTGAAAATTATTTCGTGCTCCCAACCCGAAGACTCCACTTCACGGTGTCACAATATCAGGATTTTCTATTGAGCCTTGCAGACAATTTCGTTAGGGAATTATACTCACTCGGAGTCAGGAAATTAGCCATAACAGGTCTTGTTGCCGTGGGGTGTCTCCCCTTAGAGAGGGCCACAAACATTTTAGGCCACCATGGTTGCAATCCGGAATACAACAATGTGGCTTTGACCTTCAACAACAAGTTGGATAATCTCATTTCCAAGCTTAATAGGGACCTACCACACCTCATTGCTGTGTCCGGCAATGCATATTCCATCTTCCAGGACATCATTACAAGACCCTATGCATATGGATTTGAGGTTGTGGAGAAGGCATGTTGTTCGACAGGAACATTTGAGATGAGCTACTTGTGCAGTGACAAGAATCCCCTTACATGCACAGACGCTGACAAGTACGTGTTTTGGGATGCTTTTCATCCCACGGAGAAGACAAATCGCATTGTCTCAAATTATTTGATTCCAAAACTTCTAGCAACCTTTAGATGACGTACCCCTCCATCCACAATATAACATAGTGTATACCTTTTCTGTCTTCACCTCAACTCAATCACATTCAACCTTAATTTCTACTCACTTTTTCGCCTCTTCCCTTCTTCTATGCCTTTCGCCTTTCACTCATCTTTGAATTATATATATCCAAACATATACATTGAAAAATCAAACTTAGATGAGAGGGAGAGAACAAATTTTAATTGGGACAAGAGAAAAAAAAAGTGAAAGCTAATAAATGTTAAAAG 1368 0.4225 MNTMSLAWVLLLTQIVVLATNLEAKKNIPAVIVFGDSSVDSGNNNLIDTVLKSNFRPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGIKRTIPAYLDPAYTIQDFATGVCFASAGTGYDNATSSVLNVIPLWKELELYKEYQGKLRAHVGVEKGNEIISEALYLMSLGTNDFLENYFVLPTRRLHFTVSQYQDFLLSLADNFVRELYSLGVRKLAITGLVAVGCLPLERATNILGHHGCNPEYNNVALTFNNKLDNLISKLNRDLPHLIAVSGNAYSIFQDIITRPYAYGFEVVEKACCSTGTFEMSYLCSDKNPLTCTDADKYVFWDAFHPTEKTNRIVSNYLIPKLLATFR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01006 352 Gene3D SGNH hydrolase 17 349 IPR036514 -
Pste8g01006 352 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Pste8g01006 352 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Pste8g01006 352 FunFam GDSL esterase/lipase APG 20 347 - -
Pste8g01006 352 PANTHER GDSL ESTERASE/LIPASE EXL3 13 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01006 Pste-Chr8 5279508 5284735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01006 8 349 Pollen Coat Proteome AT1G75930 36.963 3.06e-64 206