Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01004 GTCACCCTAGCTAGTCTCACAAGCAGAAGGCAGAATGGGCGATGGAAAAATAACAGCACTACTAATTGCATGCTGCCACATTATTGTGCTTGCTTTACTCTGCCTAGTGGGGAAGAGTAGTGCCAAGGTTTCGGCAGTGATCGTGTTCGGGGACTCCTCCGTGGACGCCGGCAACAACAACTTCATTCCCACCATTGCTCGGAGCAATTTCCAGCCATATGGGCGTGACTTTGAAGGTGGAAAAGCGACTGGGAGGTTCTCCAATGGGAGAATACCCACTGATTTTATATCCGAGGCTTTTGGCCTCAAACCCTACGTGCCCCCATACTTGGATCCTAAATATAACATTTCAGATTTCGCAACTGGCCTCACTTTTGCTTCTGCAGCAACTGGTTATGATAATGCTACATCAGATGTACTGTCTGTGATACCACTGTGGAAGCAATTAGAGTATTACAAGGGATACCAAAAGAATTTGAGTGCCTATCTTGGCGAAAGCAAGGCAAAGGAGACCGTAGCTGAAGCATTACACCTTATGAGCCTTGGAACAAATGACTTCCTTGAAAATTACTACACAATGCCTGGTAGAGCATCTCAATTCACACCTCAACAGTATCAAACTTTTCTTGTTGGGATAGCTGAGAACTTCATAAGGAGCCTCTATGATCTTGGTGCTAGGAAGATATCCCTAGGAGGGTTACCCCCCATGGGATGCTTGCCTCTAGAAAGGACCACAAACATTGCTGGTGGGAATGACTGTGTTGCAAGATACAATAACATAGCATTGGAGTTCAACGATAGGCTCAAGAATTTAACCATTAAGCTCAACCAGGAGCTCGCCGGAATCAAATTGGTGTTTTCAAATCCCTATTACATTATGTTGAATATCATAAAAAGACCTGAACTTTATGGATTTGTATCGACCTCAGTGGCGTGTTGTGCTACTGGAATGTTTGAGATGGGTTACGCATGTAGTAGGGGCCAGATATTCAGTTGCACAGATGCTTCTAAATATGTGTTTTGGGACTCTTTCCATCCAACTGAGAAGACAAATAGTATTGTTGCAAAGTACGTGGTGCTGCGTGTTTTATATGAATTTTTACAATAAATAACAACTAGTGAATTTATTTATGTACTAGTATCTCTTCATGTTTGCACATTCGCCTTAAAGTGCTATTTGGCCTTTCTATGAATGACTGCATGTCGATGTGTACATATATAAAAATGTCAATACAGCACATTCGCCATATATAATGTGCTGATATAATTAGAAATAAGTCGTTTTGTTTTGAACAATATATATATAGTATTTATATTTTTAGGCACTTAACTAGATTTTGGTGTCCTACATGTATGTTTTAGTTCACATATATATATATATATATATATATATATATATATATGTCCTATTATTGTGTTGGGTTTACATATAGTTTGTACGAAAT 1445 0.3972 MGDGKITALLIACCHIIVLALLCLVGKSSAKVSAVIVFGDSSVDAGNNNFIPTIARSNFQPYGRDFEGGKATGRFSNGRIPTDFISEAFGLKPYVPPYLDPKYNISDFATGLTFASAATGYDNATSDVLSVIPLWKQLEYYKGYQKNLSAYLGESKAKETVAEALHLMSLGTNDFLENYYTMPGRASQFTPQQYQTFLVGIAENFIRSLYDLGARKISLGGLPPMGCLPLERTTNIAGGNDCVARYNNIALEFNDRLKNLTIKLNQELAGIKLVFSNPYYIMLNIIKRPELYGFVSTSVACCATGMFEMGYACSRGQIFSCTDASKYVFWDSFHPTEKTNSIVAKYVVLRVLYEFLQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01004 357 Pfam GDSL-like Lipase/Acylhydrolase 35 347 IPR001087 GO:0016788
Pste8g01004 357 FunFam GDSL esterase/lipase APG 25 351 - -
Pste8g01004 357 PANTHER GDSL ESTERASE/LIPASE EXL3 20 347 - -
Pste8g01004 357 SUPERFAMILY SGNH hydrolase 168 347 - -
Pste8g01004 357 CDD SGNH_plant_lipase_like 34 347 IPR035669 -
Pste8g01004 357 Gene3D SGNH hydrolase 25 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01004 Pste-Chr8 5255392 5259131 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01004 34 348 Pollen Coat Proteome AT1G75910 36.875 3.64e-64 206