Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01001 ATGATTTCCCAGTTGATTTTAAATGGCTTTTTTCCTTCTCACCTCGCCGTGCTTCCGAAACCACAAACCCCATCTTTCTTTTCTGTCAAAGTTCAATGCTTTCGCGCTTCTGAAGCCACCCCTGTTCCAGCTTTTCCTCCTCCGAGTTCCGTTCTCTTGTCACGTTCGCCAAAACGTGTCTCTCGGCTCTTAAGGACCCAAGCTCAACACGCTCTAATGGATTACCTGCATTCCACTCGTGGCTACTCCTTCTCCGACGCCGAGTACATCAGCCAGAACTCGCCACGTTTTGTTGAATCATTGGTGTCAATGATTGACGATAAATATGATGGTCTGCGATCGTTGAAAAAATTCCTCAGGTACAACCCCATCAACGAGTTTGAACCCTTTTTTGAGAGTTTGGGAATTGACCCTTCTGAGTTGCATTTGTTTCTCCCCCATGGCCTGATTTTCTTGGCTGATGATCATTTGTTGCTTGAAAATTTTCATGCTTTGTGTAATTACGGGGTTCCAAGGAACAGAATGGGAAAGTTCTATAAGGAGGCAAAAGAGATTTTTGGGCATGCTAGCAGAGTGTTGTTGTCAAAGTTAGGAGCTTATGAGAATTTGGGTTTGAGTAGATCAACTGTTGTCAAGCTTGTTGTTTGTTGTCCTTTGCTTTTGGTTGGTGATGTTGATTGTGAATTTGTTCTTGTGCTTGATTGGTTGAAAAGAATTGGGATTGAAAGTGGTTGGATGGTAAATTACTTGTCTTGTTCAAGGACATATAGTTGGAAAAAGATGCTTGACACCATGCAGTTTCTTCGTAACATGGGTTATTCTGAACAACAAATGCGCAATTTGTTTAGGGAAAATCCTAAATTGTTGTTGGAAGGTTTTGGGAGGAAGGTATACTTGTTTTTTAGTCGATTGCGTAATGTTGGTGTTGAGATGGATTTGATTTATTCTTATTTTGTAGAGTATCCTAATATCTTTTCCAATAAGCATGCGAAAAATATGTTGAGAGTGATTGACTTTTTGTGTGCTATTGGAATGGGAAAAGATGACATTACTTACATTTTGTCTAAGTACATGCATCTCCTGATTACACGATCCTTAAAAGGTTATAAAACTGTTTGTCAGGAGTTAAAAGTTGGAAAAGCTGATTTGTGCAAAATCATAAAGGATGATCCCTTGAAGCTAATTAGTTTGGCATCAAAACAGGAGCAGAAGGGCGATGGGAAGGTAGATAGTCATGACCCACGTAATTATTTGAAAAAGACAACTTTCTTACTGAAACTGGGATATACTGAGAACTCTGAAGAGATGGCAAAAGCATTAAAAATGTTCCGAGGGAGAGGTGATCAATTACAAGAGAGGTTTGATTGCCTGGTAGAAGCTGGTTTGGACTACAATAGTGTGATCGAAATGATAAAACGAGCTCCTATGATTCTAAGCCAGAACAGGACTGTACTTAAAAAGAAGATTGATTTCCTAAGAAATGTTGTAGGTTACCCACTAGAATGTCTTGTGGGATTCCCAACATACTTTTGTCATGATTTGGACAAAATTGTTGAAAGACTTTCACTGTATGCATGGCTGAAGGAGAGCAATGCAGTAAATCCTACCTTAACCCTGAGTACCATAATTGCATCCAATGACAAACGCTTTGTAAAGTACTTTGTGAATGCGCATCCTCAAGGTCCAGCCGTCTGGAAGGGTTTAAAAAGTCCACCCGGTACTTTTGTTTCACCATTGCCGCCTGGTTATGAGAATTGGTTTGAAAAGAATTATTCCATCCTGGTTGTAAATACAGCCCCTGCATCTCTTCATGGGAAAAGTGCAGATGAAACAGAATCCTTACCTGGCACTAAAGTTGAACTAATCAAAATTGTTGAGAAAGTTGCTATGGATTCTCTATCTGATGAAGAAAAGCAAGATAAGTATAGGTCAGTCATATCTGCTGAATGA 1950 0.3974 MISQLILNGFFPSHLAVLPKPQTPSFFSVKVQCFRASEATPVPAFPPPSSVLLSRSPKRVSRLLRTQAQHALMDYLHSTRGYSFSDAEYISQNSPRFVESLVSMIDDKYDGLRSLKKFLRYNPINEFEPFFESLGIDPSELHLFLPHGLIFLADDHLLLENFHALCNYGVPRNRMGKFYKEAKEIFGHASRVLLSKLGAYENLGLSRSTVVKLVVCCPLLLVGDVDCEFVLVLDWLKRIGIESGWMVNYLSCSRTYSWKKMLDTMQFLRNMGYSEQQMRNLFRENPKLLLEGFGRKVYLFFSRLRNVGVEMDLIYSYFVEYPNIFSNKHAKNMLRVIDFLCAIGMGKDDITYILSKYMHLLITRSLKGYKTVCQELKVGKADLCKIIKDDPLKLISLASKQEQKGDGKVDSHDPRNYLKKTTFLLKLGYTENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQNRTVLKKKIDFLRNVVGYPLECLVGFPTYFCHDLDKIVERLSLYAWLKESNAVNPTLTLSTIIASNDKRFVKYFVNAHPQGPAVWKGLKSPPGTFVSPLPPGYENWFEKNYSILVVNTAPASLHGKSADETESLPGTKVELIKIVEKVAMDSLSDEEKQDKYRSVISAE 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01001 649 PANTHER CGI-12 PROTEIN-RELATED 68 557 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 Gene3D Transcription termination factor 3, mitochondrial 297 566 IPR038538 -
Pste8g01001 649 Gene3D Transcription termination factor 3, mitochondrial 120 295 IPR038538 -
Pste8g01001 649 FunFam mTERF family protein 106 255 - -
Pste8g01001 649 SMART mt_12 433 463 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 SMART mt_12 316 346 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 SMART mt_12 468 499 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 Pfam mTERF 265 481 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 Pfam mTERF 441 550 IPR003690 GO:0003690|GO:0006355
Pste8g01001 649 FunFam Transcription termination factor MTEF18, mitochondrial 300 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01001 Pste-Chr8 5250775 5254110 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste8g01001 mTERF 9.7e-17 No_clan