Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00999 AGAAGAAAAACCAAGATGTTTGGAATATGGGGTGTCGACGATGATGACCATAACAAGGATGATGAAGATGAGAGAGAGATTGAGGCAAGAGAAGATGGCAGCCAGTATAGTCTTACAGGCATTCTTCTTCCCTCTTTGGGCGCTACGGCTACTATTAATGGCAGCCGTAGAACAAAGCTTGGTCGTTATATTATTGCTCCATACAATCGTCGTTATAGAATATGGAACAAGTTTTTGATTTTATTGGTTTTCTACACTGCCTGGATATGTCCATTTGAGTTTGGTTTCCTTGAGAAATCAAAGGGTGCATTGTCTATAATTGACAATGTTGTAAATGGGTTTTTTGCCATTGACATTGTGGTCACCTTCTTTGTTGCCTACCTTGATAAGTCCACATACTTGCTAGTTGATGATCGCAAACTCATTGCTTTGAGATATGCTAAATCTTGGTTGCTCTTGGATGTAATTGCAACCATTCCTTATGAAGTTGTTCGTAGTATATTACCACCTTCTCTTCAGTTATATAGTTACTTCAATATTCTTCGTCTTTGGCGCCTCCATCGAGTTAGTGCCATGTTTGCAAGAATGGAAAAGGACAGGAATTATAGCTACTTTTGGGTGCGTTGTTGCAAGCTTACATGTGTTACTCTATTCACTGTGCATGTTGCTGCATGCTTTCTCTATTTTCTTGCTGCACGAGATAATCCGCAATCCACATGGTGGGGACTTGTTCCAGCTGCCATTGACCAGAATCTATGGGGAAAATATGTAGTATCAATATATTTGTCCATAGTGACCCTTGTATCAGTTGGTTATGGTGATCTACATCCTGTAAATACAAAAGAAATGGTATTTGACATTTTATATATGCTCTTCAATCTTGGACTAACCTCATATCTCATAGGCAATATGACCAACTTGGTTGTCCATTGGACAGAAAAAACTAAGAAATATAGAGATGCTGTCCAATCTGCATCAAATTTTGCCAAAAGGAATCGCCTACCTACCCGTTTGCAAGAACAAATGTTTGCTCATATGCTTATGAAGTACAGAACTAATTTAGAAGGACTACAACAACAAGAGGTCATTGACTCCCTTCCAAAAGCCATTCAATCTAGCATCTCACACTACTTGTTCTTTTCACTTATTGACAAAGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAAAATGAAGCACCAACAGACTTTTATATATTCGTCACCGTTCGAACCAAGCGATTGAGTCAGATCTTGCGTTTGAATCGAACCGTATTTCTAAATCTTACTCATTCAAATGTTGGAGATGGAACAATAATCATGAACAATTTTCTTGAGCATTTACATGAGTCAGAGGATTCACTGATGAAAGGAATTTTGGCAGAAACAGAAATGATGTTGGCTAGGGGAAAGATGGATTTGCCTATCAGTTTGTTGTTTGCAGCTAGCAGAGGTGATGATATATTATTGCATCAATTGTTGAAAAGGGGTTCAGATCCAAATGAACCAGATAAGAATGGAAAGACATCATTGCATATTGCAGCTGCAAAAGGTGGACACCATTGTGTAGCTTTGCTTCTAGAATATGGTGCTGATCCCAACATCAAAGACTTAGATGGAAATATCCCATTATGGGAAGCAATCAAGGGTGGGCATGAATCTATGATGAAACTTCTTGTAGACAATGGTGCAGACATATCATGTGCAGATGTAGGTTCTTTCGCATGTAAGGCTATTGAGCAAAATAGCTTAAGATTACTTCAAGGTATTGTTCAATGTGGAGGGGATGTGACACAATCCACCATCAATGGAATGACAGCACTCCATGCTGCAGTGTGTGAAGGAAATGTTGAAATAGTAAAATTCCTTCTAGAGCAAGGAGCAGATGTTGATAAGCAAGATGATAATGGATTGACTCCAAGATATTTAGCTGATCAACAATGCCATTTAGAAATAATAAACCTATTCCAGAACATTGAACACAACAAAACAATACAGTGTCAAACTGACCCAACTATACCAGGCATTCCCCAAGGAAGTAAGCCACCTAATCAAGAACTGGCATGGTTTGATAATCATCAAAGAAGAAGAATTAGCCCTTTCCAGAATTCCTTCTTTGGGATAATAATATTGAATTTCAATATTGCTTTCATTTCAGATAAGAAAGATTTCAGTATTGCATCTCAAAATAGTAACACTAGTAAAGAAGAATTAGCAGCCAGAGATACAATCAGAGTAACTCTTAATTGTCCAGAGAAAGGTGAACATGCCAAAAAGCTTCTCTTTTTGCCAAATTCCCTAGAAGAATTGTTACGTATTGGTGCCAAAAAGTTTGGTTTCTCTCCCACCAAAATATTGACCAAAGAAGGAGCTGAAATTGAAGACATACTTGTTATAAGAGATGGTGATCATCTTATACTAGCGTAG 2445 0.3804 RRKTKMFGIWGVDDDDHNKDDEDEREIEAREDGSQYSLTGILLPSLGATATINGSRRTKLGRYIIAPYNRRYRIWNKFLILLVFYTAWICPFEFGFLEKSKGALSIIDNVVNGFFAIDIVVTFFVAYLDKSTYLLVDDRKLIALRYAKSWLLLDVIATIPYEVVRSILPPSLQLYSYFNILRLWRLHRVSAMFARMEKDRNYSYFWVRCCKLTCVTLFTVHVAACFLYFLAARDNPQSTWWGLVPAAIDQNLWGKYVVSIYLSIVTLVSVGYGDLHPVNTKEMVFDILYMLFNLGLTSYLIGNMTNLVVHWTEKTKKYRDAVQSASNFAKRNRLPTRLQEQMFAHMLMKYRTNLEGLQQQEVIDSLPKAIQSSISHYLFFSLIDKVTEMKAEYFPPKEDVILQNEAPTDFYIFVTVRTKRLSQILRLNRTVFLNLTHSNVGDGTIIMNNFLEHLHESEDSLMKGILAETEMMLARGKMDLPISLLFAASRGDDILLHQLLKRGSDPNEPDKNGKTSLHIAAAKGGHHCVALLLEYGADPNIKDLDGNIPLWEAIKGGHESMMKLLVDNGADISCADVGSFACKAIEQNSLRLLQGIVQCGGDVTQSTINGMTALHAAVCEGNVEIVKFLLEQGADVDKQDDNGLTPRYLADQQCHLEIINLFQNIEHNKTIQCQTDPTIPGIPQGSKPPNQELAWFDNHQRRRISPFQNSFFGIIILNFNIAFISDKKDFSIASQNSNTSKEELAARDTIRVTLNCPEKGEHAKKLLFLPNSLEELLRIGAKKFGFSPTKILTKEGAEIEDILVIRDGDHLILA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00999 814 ProSiteProfiles Ankyrin repeat profile. 545 577 IPR002110 GO:0005515
Pste8g00999 814 FunFam Potassium channel KAT3 74 310 - -
Pste8g00999 814 SUPERFAMILY Ankyrin repeat 483 664 IPR036770 -
Pste8g00999 814 Pfam Ion transport protein 73 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste8g00999 814 PRINTS Ankyrin repeat signature 625 639 IPR002110 GO:0005515
Pste8g00999 814 PRINTS Ankyrin repeat signature 513 528 IPR002110 GO:0005515
Pste8g00999 814 Gene3D - 481 664 IPR036770 -
Pste8g00999 814 ProSiteProfiles Ankyrin repeat region circular profile. 609 641 - -
Pste8g00999 814 PANTHER POTASSIUM CHANNEL AKT1 34 414 IPR045319 GO:0005249|GO:0006813
Pste8g00999 814 Pfam Ankyrin repeats (3 copies) 584 668 IPR002110 GO:0005515
Pste8g00999 814 Pfam Ankyrin repeats (3 copies) 484 575 IPR002110 GO:0005515
Pste8g00999 814 SUPERFAMILY cAMP-binding domain-like 313 454 IPR018490 -
Pste8g00999 814 PRINTS EAG/ELK/ERG potassium channel family signature 85 92 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g00999 814 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g00999 814 PRINTS EAG/ELK/ERG potassium channel family signature 119 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g00999 814 PRINTS EAG/ELK/ERG potassium channel family signature 256 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g00999 814 PRINTS EAG/ELK/ERG potassium channel family signature 282 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g00999 814 PRINTS EAG/ELK/ERG potassium channel family signature 300 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste8g00999 814 Gene3D - 71 309 - -
Pste8g00999 814 ProSiteProfiles KHA domain profile. 751 814 IPR021789 -
Pste8g00999 814 ProSiteProfiles Ankyrin repeat region circular profile. 545 576 - -
Pste8g00999 814 ProSiteProfiles Ankyrin repeat region circular profile. 512 543 - -
Pste8g00999 814 SUPERFAMILY Voltage-gated potassium channels 67 309 - -
Pste8g00999 814 ProSiteProfiles Ankyrin repeat profile. 609 641 IPR002110 GO:0005515
Pste8g00999 814 ProSiteProfiles Ankyrin repeat profile. 512 544 IPR002110 GO:0005515
Pste8g00999 814 Pfam KHA, dimerisation domain of potassium ion channel 751 813 IPR021789 -
Pste8g00999 814 SMART ANK_2a 609 638 IPR002110 GO:0005515
Pste8g00999 814 SMART ANK_2a 545 574 IPR002110 GO:0005515
Pste8g00999 814 SMART ANK_2a 479 508 IPR002110 GO:0005515
Pste8g00999 814 SMART ANK_2a 512 541 IPR002110 GO:0005515
Pste8g00999 814 SMART ANK_2a 642 671 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00999 Pste-Chr8 5242627 5252477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00999 10 814 Ion Channels AT2G25600 52.428 0.0 892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00999 8 5242627 5252477 Pste8g00999 8 5242627 5252477 ECH
Pste8g00999 8 5242627 5252477 Pste2g01824 2 18595840 18603660 PCT