Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00991 ATGCGGAAAGGGAGAGCCACCGCCGCCGCCGCTGCCGTGGTGGATCCGTCGGCGGACCAGGACCCTCCGGCGAAGGAGACGCGCTTCCGGGGCGTGAGGAAGCGGCCCTGGGGGCGATTCGCCGCGGAGATTCGAGATCCGTGGAAAAAGCAGCGCGTGTGGTTGGGCACGTTCGATTCAGCGGAGGATGCCGCGAGGGCCTACGACGCGGCGGCCCGATCCTTCCGCGGGCCGAAGGCGAAAACGAATTTCCCCTTCCCTCAGCAGGCGGTGTATGAGGCCCACGGGCTTTCTAAGTTGGAGGCGGTTCAGGTGAACCGGCCGACGACGAGCAGCATGAGCAGCACTGTTGAGTCCTTCAGCGGGCCTAGGATTCCCTCGTCCTCCACTCTCCACCCTCACCCTCGCAAGCCCCCTATCATCCCTCTCGACGATTGCCACAGCGACTGCGACTCCTCTTCCTCCGTCGTCGACGACGAGGACTGCGTCCTCACCTCCTCCTTCCGGCAACCCCTCCCCTTCGATCTGAACCTTCCTCCTCCCTCCTCCGCCGACGACCTTCCCGCCACCGTGTTGTGCCTCTGA 585 0.6547 MRKGRATAAAAAVVDPSADQDPPAKETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFPQQAVYEAHGLSKLEAVQVNRPTTSSMSSTVESFSGPRIPSSSTLHPHPRKPPIIPLDDCHSDCDSSSSVVDDEDCVLTSSFRQPLPFDLNLPPPSSADDLPATVLCL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00991 194 MobiDBLite consensus disorder prediction 109 140 - -
Pste8g00991 194 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Pste8g00991 194 MobiDBLite consensus disorder prediction 109 128 - -
Pste8g00991 194 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Pste8g00991 194 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Pste8g00991 194 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Pste8g00991 194 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 162 - -
Pste8g00991 194 FunFam Ethylene-responsive transcription factor 2 27 86 - -
Pste8g00991 194 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Pste8g00991 194 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Pste8g00991 194 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Pste8g00991 194 MobiDBLite consensus disorder prediction 1 30 - -
Pste8g00991 194 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00991 Pste-Chr8 5194003 5194587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00991 1 194 AP2-EREBP Transcription Factor Family AT1G50640 53.947 5.48e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste8g00991 AP2 1.4e-13 CL0081